chr1 : 167,103,344 – 167,104,071
727 bp 103 TFs 1 linked gene
This 727 bp open chromatin element is linked to STYXL2 and is bound by 103 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
STYXL2 9.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:167,098,344 – 167,109,071
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 291 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 354 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 119 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 1 dataset
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 179 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD2 1 dataset
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 139 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 170 bp overlap
BRD4 3 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 237 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 284 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 210 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 288 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 265 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 181 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 175 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF886KFV 241 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 309 bp overlap
EPAS1 1 dataset
ChIP PC-3_hypoxia GSE106305.EPAS1.PC-3_hypoxia 212 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 325 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 217 bp overlap
FOS 7 datasets
ChIP CD4 GSE116695.FOS.CD4 370 bp overlap
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 443 bp overlap
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 188 bp overlap
ChIP MCF-7 ENCFF282FWZ 272 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 357 bp overlap
FOS::JUN 2 datasets
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 2 datasets
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 2 datasets
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 2 datasets
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 5 datasets
ChIP 143B GSE74230.FOSL1.143B 215 bp overlap
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
ChIP MDA-MB-231 GSE95303.FOSL1.MDA-MB-231 176 bp overlap
ChIP MNNG-HOS GSE74230.FOSL1.MNNG-HOS 234 bp overlap
FOSL1::JUN 2 datasets
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 2 datasets
Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap
Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL1::JUND 1 dataset
Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 9 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 247 bp overlap
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 397 bp overlap
ChIP MCF-7 ENCFF716UWP 291 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 201 bp overlap
ChIP MDA-MB-231 GSE132098.FOSL2.MDA-MB-231 223 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 226 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 350 bp overlap
FOSL2::JUN 2 datasets
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 2 datasets
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
FOXA1 9 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 535 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 371 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 522 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 289 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 444 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 286 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 500 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 549 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 484 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 376 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 561 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 362 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 374 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 270 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 360 bp overlap
HIF1A 3 datasets
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 449 bp overlap
ChIP PC-3_hypoxia_siSMAD3 GSE106305.HIF1A.PC-3_hypoxia_siSMAD3 188 bp overlap
ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 218 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 235 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
ISL2 2 datasets
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 12 datasets
ChIP 786-O GSE86092.JUN.786-O 281 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 476 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 552 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 727 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 416 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 273 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 444 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 502 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 727 bp overlap
ChIP MCF-7_TamR_BD610326 GSE128445.JUN.MCF-7_TamR_BD610326 640 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 141 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 194 bp overlap
JUN::JUNB 1 dataset
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 6 datasets
ChIP CD4 GSE116695.JUNB.CD4 406 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 482 bp overlap
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 230 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 147 bp overlap
JUND 7 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP HeLa-S3 ENCFF642OHL 321 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 156 bp overlap
ChIP PC-3 GSE29808.JUND.PC-3 257 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 260 bp overlap
Jun 2 datasets
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 309 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 280 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 181 bp overlap
MED1 1 dataset
ChIP CD4_Th1_DMSO GSE62482.MED1.CD4_Th1_DMSO 158 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 383 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 341 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 208 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 157 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 204 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 287 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 304 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 531 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 373 bp overlap
Nkx3-2 1 dataset
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 238 bp overlap
PBX2 1 dataset
Motif DE_12h DE_12h-PBX2_MA1113.3 9 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 288 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 299 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 363 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 225 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 312 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 404 bp overlap
PRDM10 1 dataset
ChIP K562 ENCFF740YLK 130 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RELA 9 datasets
ChIP 786-O GSE109953.RELA.786-O 332 bp overlap
ChIP 786-O GSE86092.RELA.786-O 246 bp overlap
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 344 bp overlap
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 357 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 323 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 416 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 394 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 383 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 308 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 327 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 336 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 336 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 297 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 290 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 260 bp overlap
SMAD3 2 datasets
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 297 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 466 bp overlap
SMAD3-HIF1A 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 326 bp overlap
SMARCA4 17 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 220 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 198 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 192 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 182 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 212 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 149 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 141 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 257 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 251 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 413 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 222 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 428 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 472 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 374 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 360 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 510 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 436 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 549 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 431 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 547 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 295 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 264 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 486 bp overlap
STAT3 2 datasets
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 207 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 181 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 270 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 267 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 310 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZNF184 1 dataset
ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 203 bp overlap
ZNF335 3 datasets
ChIP HEK293 ENCFF784SLD 314 bp overlap
ChIP HEK293 ENCFF784SLD 189 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 385 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 311 bp overlap
ZNF597 1 dataset
ChIP GM12878 GSE97661.ZNF597.GM12878 165 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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