chr7 : 141,700,854 141,701,376
522 bp 109 TFs 1 linked gene
This 522 bp open chromatin element is linked to DENND11 and is bound by 109 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
DENND11 789 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:141,695,854 – 141,706,376
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 198 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 62 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 467 bp overlap
Arid3a 1 dataset
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 156 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 437 bp overlap
BRD4 8 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 406 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 273 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 233 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 434 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 67 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 314 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 254 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 393 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 376 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 181 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 273 bp overlap
CREB1 3 datasets
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 191 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 265 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 127 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 392 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 258 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 368 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 442 bp overlap
CTCF 23 datasets
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 230 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 201 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 399 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 209 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 105 bp overlap
ChIP T-cell GSE115893.CTCF.T-cell 210 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 249 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 207 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 258 bp overlap
ChIP chondrocyte ENCFF134ORZ 150 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 134 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 199 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 232 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 185 bp overlap
ChIP gastrocnemius medialis ENCFF307PRR 286 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 175 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 217 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 339 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 205 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 297 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 392 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 394 bp overlap
ChIP thoracic aorta ENCFF166PKA 152 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 337 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 306 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 194 bp overlap
EZH2 3 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 522 bp overlap
ChIP OCI-LY7 ENCFF395KPU 451 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 288 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 283 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 273 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 397 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 298 bp overlap
ChIP DE DE-GATA6-2 407 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 158 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 420 bp overlap
HDAC1 1 dataset
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 134 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 409 bp overlap
HMGN3 1 dataset
ChIP K562 ENCFF083BIJ 94 bp overlap
IKZF1 5 datasets
ChIP GM12878 ENCFF753XDO 53 bp overlap
ChIP GM12878 ENCFF753XDO 513 bp overlap
ChIP GM12878 ENCFF753XDO 395 bp overlap
ChIP GM12878 ENCFF824TGK 304 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 216 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF918AID 256 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 355 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 420 bp overlap
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 194 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 234 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 319 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 177 bp overlap
KDM5B 1 dataset
ChIP HepG2 ENCFF706LUI 171 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 177 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 293 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 286 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 372 bp overlap
Lef1 1 dataset
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 266 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 276 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 423 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 369 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 296 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 328 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 84 bp overlap
MYC 1 dataset
ChIP SK-N-SH GSE138295.MYC.SK-N-SH 239 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 351 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 229 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 179 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 236 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 387 bp overlap
Olig2 1 dataset
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 270 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 365 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 224 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 140 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 331 bp overlap
PRDM1 1 dataset
ChIP plasmablast GSE142493.PRDM1.plasmablast 155 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 516 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 195 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 377 bp overlap
RBM39 1 dataset
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 205 bp overlap
RELA 2 datasets
ChIP BJAB_1h-activation GSE117250.RELA.BJAB_1h-activation 231 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 177 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 302 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 466 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR820GND.RNF2.K-562 275 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 424 bp overlap
RUNX1 1 dataset
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 74 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 224 bp overlap
SAP30 3 datasets
ChIP H1 ENCFF149IOE 443 bp overlap
ChIP H1 ENCFF149IOE 325 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 499 bp overlap
SIN3A 4 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 231 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 131 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 467 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 176 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 340 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 188 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 177 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 215 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 277 bp overlap
SUZ12 4 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 228 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 168 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 120 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 240 bp overlap
Spz1 1 dataset
Motif DE_60h DE_60h-Spz1_MA0111.1 11 bp overlap
TBX21 3 datasets
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 336 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 126 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 212 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 104 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 522 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 466 bp overlap
Tcf12 1 dataset
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
U2AF2 2 datasets
ChIP Hep-G2 GSE120104.U2AF2.Hep-G2 154 bp overlap
ChIP Hep-G2 ENCSR991ADX.U2AF2.Hep-G2 119 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 100 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 124 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 376 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 397 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 490 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752POA 59 bp overlap
ZBTB48 3 datasets
ChIP HEK293 ENCFF809BPK 413 bp overlap
ChIP HEK293 ENCFF809BPK 372 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 419 bp overlap
ZEB1 2 datasets
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 145 bp overlap
ChIP RKO GSE88734.ZEB1.RKO 366 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 333 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 486 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 389 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 133 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 100 bp overlap
ZNF701 1 dataset
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 224 bp overlap
ZNF84 1 dataset
ChIP HEK293T GSE78099.ZNF84.HEK293T 101 bp overlap