chr6 : 131,918,198 131,919,385
1,187 bp 86 TFs 1 linked gene
This 1.2 kb open chromatin element is linked to LINC01013 and is bound by 86 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01013 8.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:131,913,198 – 131,924,385
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 445 bp overlap
AGO1 1 dataset
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 183 bp overlap
AR 5 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 215 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 192 bp overlap
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 217 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 603 bp overlap
ATF3 1 dataset
ChIP WTC11 ENCFF519QFH 357 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 240 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 378 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 422 bp overlap
ChIP hESC GSE33281.BRD4.hESC 109 bp overlap
CHD2 3 datasets
ChIP WA01 ENCSR000EBT.CHD2.WA01 126 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 185 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 622 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 291 bp overlap
CTCF 1 dataset
ChIP OCI-LY7 ENCFF086AXQ 77 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
E2F6 6 datasets
Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap
ChIP H1 ENCFF785DWK 282 bp overlap
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP H1 ENCFF785DWK 402 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 365 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 664 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 571 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 931 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 435 bp overlap
EZH1 1 dataset
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 208 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 221 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 776 bp overlap
GTF2F1 3 datasets
ChIP H1 ENCFF399TGL 345 bp overlap
ChIP WA01 ENCSR000EBP.GTF2F1.WA01 436 bp overlap
ChIP WA01 ENCSR000EBP.GTF2F1.WA01 585 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 217 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 280 bp overlap
HDAC6 1 dataset
ChIP WA01 ENCSR000ATQ.HDAC6.WA01 134 bp overlap
IKZF1 2 datasets
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 51 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 211 bp overlap
JUN 1 dataset
ChIP WTC11 ENCFF172UDA 354 bp overlap
JUND 4 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 423 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 567 bp overlap
KAT7 1 dataset
ChIP WTC11 ENCFF581TPB 480 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 173 bp overlap
MAX 2 datasets
ChIP WTC11 ENCFF223QFY 585 bp overlap
ChIP WTC11 ENCFF223QFY 442 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif ES_0h ES_0h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif ES_0h ES_0h-MEIS3_MA0775.2 7 bp overlap
MTA1 2 datasets
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 190 bp overlap
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 375 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 241 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 465 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 205 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 147 bp overlap
NFYB 2 datasets
ChIP WTC11 ENCFF751ZTQ 391 bp overlap
ChIP WTC11 ENCFF751ZTQ 391 bp overlap
NR2C2 1 dataset
ChIP WTC11 ENCFF896ODS 371 bp overlap
NR3C1 1 dataset
ChIP WTC11 ENCFF422OEM 516 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 438 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 171 bp overlap
PITX1 1 dataset
ChIP HepG2 ENCFF468QTQ 471 bp overlap
POLR2A 5 datasets
ChIP GM23338 ENCFF450WCS 1187 bp overlap
ChIP H1 ENCFF566JSR 1187 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF833NJP 1187 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 179 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 138 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 268 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 301 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 358 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 311 bp overlap
RBM39 1 dataset
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 202 bp overlap
REST 5 datasets
ChIP H1 ENCFF429RUE 245 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 121 bp overlap
ChIP HepG2 ENCFF122AWR 291 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 122 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 165 bp overlap
RNF2 1 dataset
ChIP WA01 ENCSR784VUY.RNF2.WA01 312 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 374 bp overlap
SIRT6 2 datasets
ChIP H1 ENCFF843QCB 265 bp overlap
ChIP WA01 ENCSR000AUS.SIRT6.WA01 230 bp overlap
SIX4 2 datasets
ChIP WTC11 ENCFF891HYW 377 bp overlap
ChIP WTC11 ENCFF891HYW 344 bp overlap
SMAD3 1 dataset
ChIP WTC11 ENCFF815YYQ 357 bp overlap
SMAD4 1 dataset
ChIP WTC11 ENCFF195KVB 371 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox7 1 dataset
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 337 bp overlap
ChIP H1 ENCFF061XZZ 263 bp overlap
TEAD4 2 datasets
ChIP WTC11 ENCFF114TZS 341 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 456 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 396 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 161 bp overlap
TRIM28 2 datasets
ChIP hESC GSE115387.TRIM28.hESC 197 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 601 bp overlap
USF1 2 datasets
ChIP WTC11 ENCFF699QGS 425 bp overlap
ChIP WTC11 ENCFF699QGS 410 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 489 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 236 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 405 bp overlap
ZNF140 1 dataset
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 179 bp overlap
ChIP WTC11 ENCFF249JUK 485 bp overlap
ZNF219 1 dataset
ChIP WTC11 ENCFF998WKU 397 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 461 bp overlap
ZNF257 1 dataset
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF263 4 datasets
ChIP HEK293 ENCFF336CWQ 591 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 479 bp overlap
ChIP HepG2 ENCFF626SSV 151 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 220 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 153 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 271 bp overlap
ZNF425 2 datasets
ChIP WTC11 ENCFF359IXT 301 bp overlap
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF582 1 dataset
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 440 bp overlap