chr6 : 131,451,407 131,451,832
425 bp 132 TFs 0 linked genes
This 425 bp open chromatin element has no linked target genes and is bound by 132 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:131,446,407 – 131,456,832
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
132 transcription factors
Source
Cell type
ATF2 1 dataset
Motif DE_24h DE_24h-ATF2_MA1632.2 10 bp overlap
ATF3 1 dataset
Motif DE_24h DE_24h-ATF3_MA0605.3 10 bp overlap
ATF7 1 dataset
Motif DE_24h DE_24h-ATF7_MA0834.2 10 bp overlap
Atf3 1 dataset
Motif DE_24h DE_24h-Atf3_MA1988.2 7 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BACH1 1 dataset
Motif DE_24h DE_24h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_24h DE_24h-BACH2_MA1101.3 11 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BATF 1 dataset
Motif DE_24h DE_24h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_24h DE_24h-BATF3_MA0835.3 7 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 125 bp overlap
BNC2 1 dataset
Motif DE_24h DE_24h-BNC2_MA1928.2 7 bp overlap
BRD4 2 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 112 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 425 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 425 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 209 bp overlap
CREB1 1 dataset
Motif DE_24h DE_24h-CREB1_MA0018.5 8 bp overlap
CREM 1 dataset
Motif DE_24h DE_24h-CREM_MA0609.3 10 bp overlap
Creb5 1 dataset
Motif DE_24h DE_24h-Creb5_MA0840.2 10 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 109 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 120 bp overlap
EOMES 2 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 284 bp overlap
ESR2 2 datasets
Motif DE_24h DE_24h-ESR2_MA0258.2 15 bp overlap
Motif DE_24h DE_24h-ESR2_MA0258.2 15 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 190 bp overlap
FOS 2 datasets
ChIP CD4 GSE116695.FOS.CD4 172 bp overlap
Motif DE_24h DE_24h-FOS_MA0476.2 8 bp overlap
FOS::JUN 2 datasets
Motif DE_24h DE_24h-FOSJUN_MA0099.4 9 bp overlap
Motif DE_24h DE_24h-FOSJUN_MA1126.2 10 bp overlap
FOSB::JUNB 2 datasets
Motif DE_24h DE_24h-FOSBJUNB_MA1135.2 9 bp overlap
Motif DE_24h DE_24h-FOSBJUNB_MA1136.1 10 bp overlap
FOSL1 1 dataset
Motif DE_24h DE_24h-FOSL1_MA0477.3 9 bp overlap
FOSL1::JUN 2 datasets
Motif DE_24h DE_24h-FOSL1JUN_MA1128.2 9 bp overlap
Motif DE_24h DE_24h-FOSL1JUN_MA1129.1 10 bp overlap
FOSL2 1 dataset
Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap
FOSL2::JUN 2 datasets
Motif DE_24h DE_24h-FOSL2JUN_MA1130.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUN_MA1131.2 10 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_24h DE_24h-FOSL2JUNB_MA1138.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUNB_MA1139.2 10 bp overlap
FOSL2::JUND 2 datasets
Motif DE_24h DE_24h-FOSL2JUND_MA1144.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUND_MA1145.2 10 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 405 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 390 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 330 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 413 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 396 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HMBOX1 1 dataset
Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
ISL2 2 datasets
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Motif DE_24h DE_24h-ISL2_MA0914.2 6 bp overlap
JDP2 1 dataset
Motif DE_24h DE_24h-JDP2_MA0656.2 10 bp overlap
JUN 6 datasets
Motif DE_24h DE_24h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 425 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 331 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 425 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 425 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 425 bp overlap
JUNB 3 datasets
ChIP CD4 GSE116695.JUNB.CD4 301 bp overlap
Motif DE_24h DE_24h-JUNB_MA0490.3 9 bp overlap
Motif DE_24h DE_24h-JUNB_MA1140.3 11 bp overlap
JUND 2 datasets
Motif DE_24h DE_24h-JUND_MA0491.3 9 bp overlap
Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap
Jun 1 dataset
Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MAF::NFE2 2 datasets
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_24h DE_24h-MAFNFE2_MA0501.2 11 bp overlap
MAFK 1 dataset
Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Msgn1 1 dataset
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NEUROG2 2 datasets
Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
NFATC2 2 datasets
ChIP CD4 GSE116695.NFATC2.CD4 130 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 239 bp overlap
NKX2-4 2 datasets
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
Motif DE_24h DE_24h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 2 datasets
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
Motif DE_24h DE_24h-NKX2-8_MA0673.2 8 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 313 bp overlap
NR2C1 1 dataset
Motif DE_24h DE_24h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_24h DE_24h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_24h DE_24h-NR2F1_MA1538.1 15 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nkx2-1 1 dataset
Motif DE_24h DE_24h-Nkx2-1_MA1994.2 7 bp overlap
Nkx3-2 2 datasets
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
Motif DE_24h DE_24h-Nkx3-2_MA0122.4 10 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_24h DE_24h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_24h DE_24h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_24h DE_24h-Nr1h3_MA2337.1 6 bp overlap
Nr1h3::Rxra 2 datasets
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_24h DE_24h-Nr1h3Rxra_MA0494.2 16 bp overlap
OSR2 1 dataset
Motif DE_24h DE_24h-OSR2_MA1646.2 8 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 342 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
ChIP islet ERP001456.PDX1.islet 216 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 161 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 120 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 263 bp overlap
PPARG 1 dataset
Motif DE_24h DE_24h-PPARG_MA0066.2 19 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 213 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 357 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 320 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 385 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 293 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 71 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 425 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 425 bp overlap
SMARCC1 2 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 255 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 425 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 371 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 230 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Stat5a 1 dataset
Motif DE_24h DE_24h-Stat5a_MA1624.2 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 296 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
THRA 1 dataset
Motif DE_24h DE_24h-THRA_MA1969.2 18 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif DE_24h DE_24h-THRB_MA1576.2 18 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF157 1 dataset
Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap
ZNF24 1 dataset
ChIP HepG2 ENCFF361LZL 297 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF317 1 dataset
Motif DE_24h DE_24h-ZNF317_MA1593.2 8 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF418 1 dataset
Motif DE_24h DE_24h-ZNF418_MA1980.1 15 bp overlap
ZNF701 1 dataset
Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap
ZNF708 1 dataset
Motif DE_24h DE_24h-ZNF708_MA1730.2 9 bp overlap
ZSCAN4 1 dataset
Motif DE_24h DE_24h-ZSCAN4_MA1155.1 15 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap