chr6 : 131,029,765 131,030,316
551 bp 92 TFs 0 linked genes
This 551 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:131,024,765 – 131,035,316
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
ARID1A 4 datasets
ChIP 12Z GSE129781.ARID1A.12Z 355 bp overlap
ChIP HAP1 GSE108387.ARID1A.HAP1 211 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 183 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 182 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 283 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 231 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF010ZUU 331 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 161 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 171 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 456 bp overlap
BRD4 7 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 337 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 278 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 230 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 204 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 279 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 279 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 193 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 106 bp overlap
CHD4 2 datasets
ChIP SCMC GSE155861.CHD4.SCMC 218 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 153 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 364 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 72 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 334 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 252 bp overlap
ChIP GM12878 ENCFF813OXE 212 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 202 bp overlap
ChIP LCL GSE75503.EBF1.LCL 233 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 243 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 147 bp overlap
ESR1 2 datasets
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 202 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 551 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 224 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 141 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 302 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 293 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 213 bp overlap
GATA2 2 datasets
ChIP TF1 GSE73207.GATA2.TF1 164 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 184 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 127 bp overlap
ChIP DE DE-GATA4-1 453 bp overlap
ChIP DE DE-GATA4-2 425 bp overlap
ChIP foregut GSE117136.GATA4.foregut 336 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 235 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 511 bp overlap
ChIP DE DE-GATA6-2 424 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 188 bp overlap
ChIP foregut GSE117136.GATA6.foregut 417 bp overlap
HDAC2 1 dataset
ChIP K-562 GSE140325.HDAC2.K-562 92 bp overlap
HNF1A 2 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 158 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 93 bp overlap
HNF1B 3 datasets
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 551 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 136 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 255 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 255 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 414 bp overlap
ChIP GM12878 ENCFF918AID 463 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 329 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 378 bp overlap
IRF4 3 datasets
ChIP B-cell GSE142493.IRF4.B-cell 475 bp overlap
ChIP BC-3 GSE132777.IRF4.BC-3 196 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 149 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 91 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 124 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 174 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 137 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 117 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 208 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 251 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 89 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 144 bp overlap
MED1 4 datasets
ChIP SGBS GSE64233.MED1.SGBS 232 bp overlap
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 139 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 171 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 96 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 265 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 439 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 186 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCFF615CWQ 509 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 382 bp overlap
MYC 2 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 54 bp overlap
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 206 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 168 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 186 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 157 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 101 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 156 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 219 bp overlap
NR3C1 4 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 65 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 106 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 50 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 71 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 75 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 170 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 148 bp overlap
POU3F1 1 dataset
ChIP SKM-1_D2 GSE93706.POU3F1.SKM-1_D2 76 bp overlap
POU3F2 2 datasets
ChIP hiPSC GSE149017.POU3F2.hiPSC 56 bp overlap
ChIP hiPSC_SGC0946 GSE149017.POU3F2.hiPSC_SGC0946 119 bp overlap
POU5F1 4 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 154 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 79 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 168 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 141 bp overlap
PPARG 1 dataset
ChIP SGBS GSE41629.PPARG.SGBS 205 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 350 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 374 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 285 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 278 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 194 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 314 bp overlap
RELA 2 datasets
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 161 bp overlap
ChIP SGBS GSE64233.RELA.SGBS 228 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 450 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 74 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 148 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 114 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 191 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 79 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 166 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 551 bp overlap
SMARCA2 2 datasets
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 211 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 144 bp overlap
SMARCA4 14 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 116 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 116 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 192 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 273 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 95 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 63 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 101 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 191 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 97 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 253 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 114 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 137 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 74 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 498 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 326 bp overlap
SMARCC1 2 datasets
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 95 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 121 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 213 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 207 bp overlap
SOX2 7 datasets
ChIP HNSC GSE69479.SOX2.HNSC 427 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 248 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 261 bp overlap
ChIP OSK GSE81899.SOX2.OSK 214 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 185 bp overlap
ChIP OSvK GSE81899.SOX2.OSvK 92 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 145 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 197 bp overlap
SPI1 5 datasets
ChIP DC_LPS GSE123347.SPI1.DC_LPS 173 bp overlap
ChIP GM12878 ENCFF134LCP 191 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 172 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 171 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 200 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 347 bp overlap
TCF12 2 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 66 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 219 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 187 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 134 bp overlap
TEAD1 3 datasets
ChIP MSTO GSE68170.TEAD1.MSTO 139 bp overlap
ChIP adipocyte GSE140782.TEAD1.adipocyte 122 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 99 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 58 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 153 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 161 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 321 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 169 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 321 bp overlap
USF2 1 dataset
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 126 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 453 bp overlap
ZNF384 2 datasets
ChIP GM12878 ENCFF229VSP 319 bp overlap
ChIP GM12878 ENCSR000DYP.ZNF384.GM12878 207 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 326 bp overlap