chr6 : 19,327,741 19,328,013
272 bp 99 TFs 0 linked genes
This 272 bp open chromatin element has no linked target genes and is bound by 99 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:19,322,741 – 19,333,013
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 121 bp overlap
ChIP NGP GSE134626.ARID1A.NGP 253 bp overlap
ATF2 2 datasets
ChIP HEK293 ENCFF194VKZ 272 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 262 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 98 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 160 bp overlap
BCL11A 2 datasets
ChIP HEK293 ENCFF294OHB 269 bp overlap
ChIP HEK293 ENCSR021DJC.BCL11A.HEK293 272 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 139 bp overlap
BRD4 2 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 207 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 208 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT967 GSE128230.CDK8.leiomyoma_PT967 57 bp overlap
CDX2 1 dataset
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
CTBP1 2 datasets
ChIP HEK293T ENCFF003PDY 136 bp overlap
ChIP HEK293T ENCSR237TFX.CTBP1.HEK293T 263 bp overlap
CTCF 12 datasets
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 100 bp overlap
ChIP esophagus muscularis mucosa ENCFF421MEH 188 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 152 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 120 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 141 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 72 bp overlap
ChIP gastroesophageal sphincter ENCFF918KPI 153 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 160 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 108 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 132 bp overlap
ChIP lower lobe of left lung ENCFF150FXW 217 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 176 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 235 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 183 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 254 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 206 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 217 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 235 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 266 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 198 bp overlap
GATA3 3 datasets
ChIP BE2C GSE65664.GATA3.BE2C 240 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 195 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 193 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 266 bp overlap
GATA6 2 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 233 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 238 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GLI2 2 datasets
ChIP HEK293 ENCFF700EUN 90 bp overlap
ChIP HEK293 ENCSR978EQY.GLI2.HEK293 185 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 178 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 272 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 272 bp overlap
HOXB13 2 datasets
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 163 bp overlap
HOXD13 1 dataset
ChIP HEK293 ENCFF590OUV 255 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_12h DE_12h-Hoxd13_MA0909.4 7 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 272 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 272 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 179 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 166 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 272 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 218 bp overlap
KLF3 1 dataset
ChIP HEK293 GSE69739.KLF3.HEK293 200 bp overlap
KLF5 1 dataset
ChIP HEK293 GSE88976.KLF5.HEK293 163 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 201 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 272 bp overlap
MEIS1 2 datasets
ChIP A-673 GSE109477.MEIS1.A-673 219 bp overlap
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 265 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 272 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 208 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 264 bp overlap
PAX5 1 dataset
ChIP OCI-Ly7 GSE69558.PAX5.OCI-Ly7 201 bp overlap
PBX2 1 dataset
Motif DE_12h DE_12h-PBX2_MA1113.3 9 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 213 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 208 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 272 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 272 bp overlap
POLR2A 1 dataset
ChIP esophagus muscularis mucosa ENCFF759BBR 172 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 180 bp overlap
PRDM6 4 datasets
ChIP HEK293 ENCFF283AJL 197 bp overlap
ChIP HEK293 ENCFF283AJL 71 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 237 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 64 bp overlap
RAD21 2 datasets
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 272 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 272 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 198 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 225 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 215 bp overlap
SMARCA4 4 datasets
ChIP NGP GSE134626.SMARCA4.NGP 187 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 180 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 158 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 272 bp overlap
SP5_Zebrafish 2 datasets
ChIP HEK293_Zebrafish_dDBD GSE121316.SP5_Zebrafish.HEK293_Zebrafish_dDBD 211 bp overlap
ChIP HEK293_dDBD GSE110277.SP5_Zebrafish.HEK293_dDBD 181 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 272 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 272 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 272 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 272 bp overlap
TSHZ1 2 datasets
ChIP HEK293 ENCFF893BGV 272 bp overlap
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 272 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 229 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 272 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 272 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 272 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 174 bp overlap
ZBTB1 2 datasets
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 179 bp overlap
ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 50 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 272 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 168 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 255 bp overlap
ZEB1 2 datasets
ChIP HEK293 ENCFF007TAP 270 bp overlap
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 272 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 259 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 272 bp overlap
ZIM3 1 dataset
ChIP HEK293T GSE78099.ZIM3.HEK293T 52 bp overlap
ZNF132 1 dataset
ChIP HEK293T GSE78099.ZNF132.HEK293T 159 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 206 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 272 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 272 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 272 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 272 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 272 bp overlap
ZNF341 2 datasets
ChIP HEK293 GSE76494.ZNF341.HEK293 272 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 258 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 141 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 230 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 272 bp overlap
ZNF639 2 datasets
ChIP HEK293 ENCFF971ZNH 272 bp overlap
ChIP HEK293 ENCSR080CST.ZNF639.HEK293 258 bp overlap
ZNF654 2 datasets
ChIP HEK293 ENCFF636WIC 252 bp overlap
ChIP HEK293 ENCSR504VDV.ZNF654.HEK293 184 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF76 2 datasets
ChIP HEK293 ENCFF374TCG 272 bp overlap
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 266 bp overlap
ZNF84 1 dataset
ChIP HEK293T GSE78099.ZNF84.HEK293T 171 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 272 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 241 bp overlap
ZSCAN16 2 datasets
ChIP HEK293 ENCFF533NFT 134 bp overlap
ChIP HEK293 ENCSR864VJE.ZSCAN16.HEK293 270 bp overlap