chr5 : 176,866,834 176,867,401
567 bp 90 TFs 5 linked genes
This 567 bp open chromatin element is linked to 5 target genes and is bound by 90 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
UIMC1 139.7 kb Distal Multiome
ZNF346 155.6 kb Distal Multiome
TSPAN17 219.6 kb Distal Multiome
FGFR4 219.8 kb Distal Multiome
NSD1 264.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:176,861,834 – 176,872,401
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 221 bp overlap
ChIP K562 ENCFF938UXQ 541 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 300 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 195 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 242 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 286 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 320 bp overlap
BRD4 9 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 274 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 227 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 233 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 237 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 567 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 316 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 391 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 567 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 212 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 199 bp overlap
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 394 bp overlap
ChIP K562 ENCFF673OEZ 206 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 361 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 461 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 254 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 426 bp overlap
CTCF 4 datasets
ChIP BE2C ENCFF757SRF 137 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 60 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 118 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 84 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 172 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 543 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 135 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 115 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 156 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 463 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 324 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 289 bp overlap
EZH2 15 datasets
ChIP GM23248 ENCFF404ZHM 469 bp overlap
ChIP GM23248 ENCFF404ZHM 451 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 491 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 567 bp overlap
ChIP astrocyte ENCFF365JTP 567 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 449 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 567 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 327 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 567 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 567 bp overlap
ChIP fibroblast of lung ENCFF479BAW 317 bp overlap
ChIP fibroblast of lung ENCFF479BAW 118 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 567 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 567 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 498 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 457 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 441 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
GABPA 1 dataset
ChIP H1 ENCFF739QFD 329 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 275 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 157 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 235 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 257 bp overlap
GATA2 6 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 114 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
ChIP SH-SY5Y ENCFF485YIB 129 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 454 bp overlap
ChIP SK-N-SH ENCFF764OZD 177 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 441 bp overlap
GATA3 4 datasets
ChIP BE2C GSE65664.GATA3.BE2C 163 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 253 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 152 bp overlap
ChIP SK-N-SH ENCFF040SSB 365 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 539 bp overlap
ChIP DE DE-GATA4-2 508 bp overlap
ChIP foregut GSE117136.GATA4.foregut 454 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 355 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 362 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 509 bp overlap
ChIP DE DE-GATA6-2 567 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 567 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 453 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 567 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 516 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 563 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 567 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 388 bp overlap
ChIP foregut GSE117136.GATA6.foregut 437 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 400 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 309 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 396 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 256 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 533 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 176 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 478 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 497 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 385 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 193 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 226 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 203 bp overlap
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 254 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 434 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 180 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 193 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 360 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 237 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 482 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 369 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 277 bp overlap
MYCN 10 datasets
ChIP BE2C GSE80151.MYCN.BE2C 307 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 523 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 529 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 123 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 229 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 540 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 567 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 184 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 307 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 213 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 193 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 222 bp overlap
NR2C1 3 datasets
ChIP K-562 ENCSR178DEG.NR2C1.K-562 337 bp overlap
ChIP K-562 ENCSR742IDN.NR2C1.K-562 278 bp overlap
ChIP K562 ENCFF568JLK 222 bp overlap
NR2C2 3 datasets
ChIP K-562 ENCSR750LYM.NR2C2.K-562 314 bp overlap
ChIP K562 ENCFF750AXF 567 bp overlap
ChIP K562 ENCFF902UIK 405 bp overlap
NR2F1 3 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 543 bp overlap
ChIP K562 ENCFF221HJH 308 bp overlap
ChIP K562 ENCFF221HJH 299 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 266 bp overlap
ChIP K562 ENCFF004YPK 129 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 342 bp overlap
ChIP K562 ENCFF674RQA 457 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 223 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 282 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 355 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 335 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 567 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 425 bp overlap
PPARA 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR602QEJ.PPARA.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 206 bp overlap
RAD21 4 datasets
ChIP MDM GSE103477.RAD21.MDM 209 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 362 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 297 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 294 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 389 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 103 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 463 bp overlap
REST 3 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 125 bp overlap
ChIP PFSK-1 ENCFF845VHA 321 bp overlap
ChIP neural ENCSR000BTV.REST.neural 131 bp overlap
RFX5 2 datasets
ChIP SK-N-SH ENCFF755HLO 341 bp overlap
ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 172 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 426 bp overlap
SMARCA4 7 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 230 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 536 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 295 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 138 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 359 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 534 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 187 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 239 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 567 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 288 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 164 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 442 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 300 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 288 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 242 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 219 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 343 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 313 bp overlap
ChIP K562 ENCFF059YCJ 437 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 519 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 254 bp overlap
TAL1 10 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 279 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 249 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 269 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 234 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 247 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 234 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 224 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 230 bp overlap
ChIP K562 ENCFF620GMX 385 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 411 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 237 bp overlap
TCF12 3 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 211 bp overlap
ChIP K562 ENCFF931DJY 391 bp overlap
ChIP SK-N-SH ENCFF147AHB 391 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 212 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 437 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 303 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 303 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 532 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 114 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 397 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 445 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 507 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 297 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 320 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 381 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 530 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 440 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 440 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 117 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 148 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 221 bp overlap
ZNF319 2 datasets
ChIP K-562 ENCSR231PDA.ZNF319.K-562 273 bp overlap
ChIP K562 ENCFF561ZSB 361 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 249 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 456 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 168 bp overlap