chr4 : 83,850,193 83,850,844
651 bp 105 TFs 0 linked genes
This 651 bp open chromatin element has no linked target genes and is bound by 105 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:83,845,193 – 83,855,844
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
105 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 154 bp overlap
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 359 bp overlap
ARNT 2 datasets
ChIP RCC10 GSE101063.ARNT.RCC10 354 bp overlap
ChIP RCC4 GSE85352.ARNT.RCC4 285 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 180 bp overlap
Arid3b 1 dataset
Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 221 bp overlap
BRD2 4 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 225 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 225 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 239 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 239 bp overlap
BRD4 12 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 211 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 239 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 254 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 317 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 317 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 239 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 287 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 285 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 100 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 349 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 366 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 320 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CEBPB 1 dataset
ChIP A-549 ENCSR000BUB.CEBPB.A-549 117 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 202 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 329 bp overlap
ChIP BLaER1 ENCFF274GAT 238 bp overlap
ChIP BLaER1 ENCFF335XTP 251 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dmbx1 1 dataset
Motif DE_12h DE_12h-Dmbx1_MA0883.2 10 bp overlap
EP300 1 dataset
ChIP A-549 ENCSR000BPW.EP300.A-549 337 bp overlap
EPAS1 1 dataset
ChIP 786-O GSE34871.EPAS1.786-O 160 bp overlap
ESRRA 9 datasets
ChIP A-549 ENCSR473SUA.ESRRA.A-549 71 bp overlap
ChIP BT-474 GSE81651.ESRRA.BT-474 309 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 68 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 182 bp overlap
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 245 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 272 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 387 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 405 bp overlap
ChIP WTC11 ENCFF591YCA 250 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 214 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 76 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 256 bp overlap
ChIP A-549 ENCSR448TVS.FOSL2.A-549 260 bp overlap
GATA3 2 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 250 bp overlap
ChIP A549 ENCFF226FVV 421 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 287 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 226 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HIF1A 3 datasets
Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap
ChIP RCC10 GSE101063.HIF1A.RCC10 434 bp overlap
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 224 bp overlap
HNF1A 2 datasets
Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap
ChIP HEE_1 GSE76376.HNF1A.HEE_1 184 bp overlap
HNF1B 2 datasets
Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 359 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
JUN 5 datasets
ChIP 786-O GSE86092.JUN.786-O 257 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 346 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 651 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 454 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 508 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 230 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 184 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MAX 3 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 198 bp overlap
ChIP A549 ENCFF310XGQ 502 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MED1 3 datasets
ChIP A-549 GSE76893.MED1.A-549 192 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 205 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 336 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 252 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 501 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 206 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 241 bp overlap
NR3C1 10 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 331 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 242 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 241 bp overlap
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 262 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 281 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 75 bp overlap
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 206 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 64 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 307 bp overlap
ChIP U2OS_SHNS GSE65847.NR3C1.U2OS_SHNS 234 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 2 datasets
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
ChIP WTC11 ENCFF634NAO 245 bp overlap
PBX3 1 dataset
ChIP A-549 ENCSR000BTN.PBX3.A-549 176 bp overlap
PGR 4 datasets
ChIP T-47D GSE31129.PGR.T-47D 242 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 174 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 139 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 240 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 407 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 209 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 517 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 397 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 295 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
RAD21 1 dataset
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 353 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RCOR1 2 datasets
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 163 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 204 bp overlap
RELA 3 datasets
ChIP 786-O GSE86092.RELA.786-O 416 bp overlap
ChIP 786-O GSE109953.RELA.786-O 320 bp overlap
ChIP KB_IL GSE52469.RELA.KB_IL 111 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 356 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 288 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 299 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 500 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 405 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 607 bp overlap
SMAD3 4 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 291 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 402 bp overlap
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 281 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 366 bp overlap
SMARCA4 1 dataset
ChIP TOV-21G_resistant GSE110448.SMARCA4.TOV-21G_resistant 204 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 78 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 324 bp overlap
STAT3 1 dataset
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 163 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 204 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 366 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 193 bp overlap
TEAD4 4 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 205 bp overlap
ChIP A549 ENCFF243FTL 277 bp overlap
ChIP HUCCT1 GSE68296.TEAD4.HUCCT1 260 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 345 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 328 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
YAP1 1 dataset
ChIP MDA-MB-231 GSE66081.YAP1.MDA-MB-231 211 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZMYM3 1 dataset
ChIP Hep-G2_AC_JH39-2-2B9 GSE97661.ZMYM3.Hep-G2_AC_JH39-2-2B9 219 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 338 bp overlap
ChIP HepG2 ENCFF490FFQ 160 bp overlap