chr4 : 30,838,015 30,838,886
871 bp 119 TFs 0 linked genes
This 871 bp open chromatin element has no linked target genes and is bound by 119 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:30,833,015 – 30,843,886
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HCT-116 GSE47938.AFF4.HCT-116 539 bp overlap
ARNT::HIF1A 2 datasets
Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap
Motif DE_72h DE_72h-ARNTHIF1A_MA0259.2 5 bp overlap
Alx1 1 dataset
Motif DE_60h DE_60h-Alx1_MA0854.2 8 bp overlap
Alx4 1 dataset
Motif DE_60h DE_60h-Alx4_MA0853.2 12 bp overlap
Arnt 2 datasets
Motif DE_60h DE_60h-Arnt_MA0004.1 6 bp overlap
Motif DE_72h DE_72h-Arnt_MA0004.1 6 bp overlap
BARX1 1 dataset
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
BRD4 3 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 389 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 162 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 490 bp overlap
BSX 1 dataset
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 276 bp overlap
CDK9 1 dataset
ChIP HEK293T_SIBRD4 GSE51633.CDK9.HEK293T_SIBRD4 142 bp overlap
Creb3l2 2 datasets
Motif DE_60h DE_60h-Creb3l2_MA0608.1 9 bp overlap
Motif DE_72h DE_72h-Creb3l2_MA0608.1 9 bp overlap
DLX1 1 dataset
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 225 bp overlap
ETV7 2 datasets
Motif DE_60h DE_60h-ETV7_MA1708.2 9 bp overlap
Motif DE_72h DE_72h-ETV7_MA1708.2 9 bp overlap
FOXA1 2 datasets
Motif DE_60h DE_60h-FOXA1_MA0148.5 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 308 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 787 bp overlap
ChIP DE DE-FOXA2-2 793 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 316 bp overlap
FOXB1 1 dataset
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXD2 3 datasets
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
FOXE1 3 datasets
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_60h DE_60h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap
FOXH1 1 dataset
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
FOXK1 1 dataset
Motif DE_60h DE_60h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_60h DE_60h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_60h DE_60h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_60h DE_60h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
FOXP2 1 dataset
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_60h DE_60h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif DE_60h DE_60h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_60h DE_60h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_60h DE_60h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
GATA2 4 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 146 bp overlap
GATA3 4 datasets
ChIP BE2C GSE65664.GATA3.BE2C 220 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 245 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 206 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 220 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 554 bp overlap
ChIP DE DE-GATA4-2 609 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 498 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 228 bp overlap
ChIP foregut GSE117136.GATA4.foregut 333 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 663 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 498 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 527 bp overlap
ChIP DE DE-GATA6-2 786 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 306 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 514 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 555 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 446 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 270 bp overlap
ChIP foregut GSE117136.GATA6.foregut 324 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 404 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 449 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 445 bp overlap
GBX2 1 dataset
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 277 bp overlap
HESX1 1 dataset
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
HMGA1 1 dataset
ChIP IMR-90_RAS-induced GSE111841.HMGA1.IMR-90_RAS-induced 60 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 77 bp overlap
HOXA7 1 dataset
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
Hmx3 1 dataset
Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 168 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 473 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 163 bp overlap
LBX2 1 dataset
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
MAX 3 datasets
Motif DE_60h DE_60h-MAX_MA0058.4 6 bp overlap
Motif DE_72h DE_72h-MAX_MA0058.4 6 bp overlap
ChIP HCT116 ENCFF810LEN 497 bp overlap
MAX::MYC 2 datasets
Motif DE_60h DE_60h-MAXMYC_MA0059.2 10 bp overlap
Motif DE_72h DE_72h-MAXMYC_MA0059.2 10 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 258 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 844 bp overlap
MEF2A 1 dataset
Motif DE_60h DE_60h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif DE_60h DE_60h-MEF2C_MA0497.2 11 bp overlap
MNT 2 datasets
Motif DE_60h DE_60h-MNT_MA0825.2 6 bp overlap
Motif DE_72h DE_72h-MNT_MA0825.2 6 bp overlap
MSX1 1 dataset
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 163 bp overlap
MYBL2 2 datasets
ChIP A-673 GSE119971.MYBL2.A-673 198 bp overlap
ChIP A-673 GSE119971.MYBL2.A-673 302 bp overlap
MYC 2 datasets
Motif DE_60h DE_60h-MYC_MA0147.4 8 bp overlap
Motif DE_72h DE_72h-MYC_MA0147.4 8 bp overlap
MYCN 11 datasets
ChIP BE2C GSE80151.MYCN.BE2C 314 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 183 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 295 bp overlap
Motif DE_60h DE_60h-MYCN_MA0104.5 8 bp overlap
Motif DE_72h DE_72h-MYCN_MA0104.5 8 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 352 bp overlap
ChIP Kelly GSE80151.MYCN.Kelly 192 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 416 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 262 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 309 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 220 bp overlap
Mlxip 2 datasets
Motif DE_60h DE_60h-Mlxip_MA0622.2 6 bp overlap
Motif DE_72h DE_72h-Mlxip_MA0622.2 6 bp overlap
Msx3 1 dataset
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
NKX2-2 2 datasets
Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_72h DE_72h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 2 datasets
Motif DE_60h DE_60h-NKX2-5_MA0063.3 7 bp overlap
Motif DE_72h DE_72h-NKX2-5_MA0063.3 7 bp overlap
Nobox 1 dataset
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
Nr2e3 2 datasets
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_72h DE_72h-Nr2e3_MA0164.2 6 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 237 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 232 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 456 bp overlap
PHIP 4 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 871 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 286 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 293 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 374 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 227 bp overlap
POU3F3 1 dataset
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 264 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 445 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 498 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 619 bp overlap
RAD21 1 dataset
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 257 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 287 bp overlap
RAX 1 dataset
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 490 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 207 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 494 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 482 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 218 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 450 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 519 bp overlap
SPIB 2 datasets
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 314 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 282 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 613 bp overlap
Sox6 2 datasets
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 306 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 310 bp overlap
TEAD1 1 dataset
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
TEAD4 1 dataset
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZIM3 3 datasets
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZKSCAN5 2 datasets
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF213 2 datasets
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
ZNF257 1 dataset
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
ZNF354A 1 dataset
Motif DE_48h DE_48h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 1 dataset
Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap
ZNF418 1 dataset
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
ZNF547 1 dataset
Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap
ZNF574 1 dataset
Motif DE_60h DE_60h-ZNF574_MA1982.2 14 bp overlap
ZNF766 1 dataset
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap
ZNF85 1 dataset
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 525 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 470 bp overlap
Zfp335 2 datasets
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap