chr2 : 226,694,130 226,694,732
602 bp 100 TFs 0 linked genes
This 602 bp open chromatin element has no linked target genes and is bound by 100 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:226,689,130 – 226,699,732
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
ARID3A 2 datasets
ChIP HepG2 ENCFF341DES 503 bp overlap
ChIP HepG2 ENCFF341DES 328 bp overlap
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 239 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 176 bp overlap
BRD4 2 datasets
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 291 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 233 bp overlap
CBX3 1 dataset
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 230 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 253 bp overlap
CEBPB 5 datasets
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 233 bp overlap
ChIP HCT116 ENCFF097OLY 417 bp overlap
ChIP HCT116 ENCFF097OLY 342 bp overlap
ChIP Ishikawa ENCFF010USJ 261 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 179 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 306 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF3 4 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 545 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 562 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 351 bp overlap
EP300 4 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 156 bp overlap
ChIP HepG2 ENCFF354ACD 325 bp overlap
ChIP Ishikawa ENCFF364ZWT 414 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 216 bp overlap
ESR1 13 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 177 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 251 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 270 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 253 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 341 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 263 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 309 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 208 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 287 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 513 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 213 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 317 bp overlap
ChIP primary-endometrium-cancer_E2_DSG GSE114737.ESR1.primary-endometrium-cancer_E2_DSG 252 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
EZH2 1 dataset
ChIP Loucy ENCFF586BXS 277 bp overlap
FLI1 1 dataset
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 280 bp overlap
FOSL1 1 dataset
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 251 bp overlap
FOXA1 8 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 426 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 507 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 567 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 106 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 123 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 530 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 602 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 514 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 518 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 464 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 511 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 419 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 320 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 287 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 558 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 596 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 465 bp overlap
HOXB13 1 dataset
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 249 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 537 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 352 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 155 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 309 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 375 bp overlap
JUND 1 dataset
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 220 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 218 bp overlap
MED1 2 datasets
ChIP SGBS GSE64233.MED1.SGBS 363 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 181 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 202 bp overlap
MYB 2 datasets
ChIP Loucy GSE94000.MYB.Loucy 511 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 220 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 211 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 112 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 117 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 264 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 109 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 201 bp overlap
PGR 1 dataset
Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 287 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 250 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 140 bp overlap
POLR2A 1 dataset
ChIP HCT116 ENCFF508RDJ 454 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
PPARG 3 datasets
ChIP ASC GSE21366.PPARG.ASC 282 bp overlap
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 192 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 145 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 394 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP SGBS GSE64233.RELA.SGBS 171 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 149 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 150 bp overlap
SIX1 2 datasets
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 154 bp overlap
SIX2 4 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 343 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 293 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 316 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 602 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 403 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 191 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 550 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 313 bp overlap
SMARCA2 4 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 582 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 306 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 203 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 464 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 316 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 233 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 190 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 391 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 526 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 317 bp overlap
ChIP HCT116 ENCFF800LBN 437 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 360 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 166 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat4 1 dataset
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 243 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 180 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 5 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 586 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 352 bp overlap
ChIP HCT116 ENCFF038POZ 354 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 401 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 219 bp overlap
TEF 1 dataset
Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 197 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 237 bp overlap
ZNF24 2 datasets
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ChIP Hep-G2 ENCSR362NWP.ZNF24.Hep-G2 306 bp overlap
ZNF317 1 dataset
ChIP HepG2 ENCFF018ISP 88 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 385 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 237 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF770 2 datasets
ChIP HEK293 GSE76494.ZNF770.HEK293 184 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 241 bp overlap