chr2 : 167,832,817 – 167,833,274

457 bp 107 TFs 0 linked genes

This 457 bp open chromatin element has no linked target genes and is bound by 107 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

107 transcription factors

AR 1 dataset

ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 157 bp overlap

BRD3 1 dataset

ChIP K-562_IBET151_50nM GSE120715.BRD3.K-562_IBET151_50nM 198 bp overlap

BRD4 2 datasets

ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 415 bp overlap

ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 378 bp overlap

CEBPA 1 dataset

Motif DE_36h DE_36h-CEBPA_MA0102.5 10 bp overlap

CEBPD 1 dataset

Motif DE_36h DE_36h-CEBPD_MA0836.3 8 bp overlap

CEBPG 1 dataset

Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 114 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 209 bp overlap

ERG 2 datasets

ChIP Jurkat GSE49091.ERG.Jurkat 144 bp overlap

ChIP Jurkat GSE49091.ERG.Jurkat 148 bp overlap

ESR1_Y537S 1 dataset

ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 172 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap

EZH2 3 datasets

ChIP A-1847 GSE95643.EZH2.A-1847 303 bp overlap

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 103 bp overlap

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 73 bp overlap

FLI1 1 dataset

ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 152 bp overlap

FOXA1 1 dataset

Motif DE_24h DE_24h-FOXA1_MA0148.5 8 bp overlap

FOXA2 1 dataset

ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 180 bp overlap

FOXB1 1 dataset

Motif DE_24h DE_24h-FOXB1_MA0845.1 11 bp overlap

FOXC1 1 dataset

Motif DE_24h DE_24h-FOXC1_MA0032.2 11 bp overlap

FOXC2 1 dataset

Motif DE_24h DE_24h-FOXC2_MA0846.2 11 bp overlap

FOXD2 1 dataset

Motif DE_24h DE_24h-FOXD2_MA0847.4 11 bp overlap

FOXD3 1 dataset

Motif DE_24h DE_24h-FOXD3_MA0041.3 14 bp overlap

FOXE1 1 dataset

Motif DE_24h DE_24h-FOXE1_MA1487.3 12 bp overlap

FOXF2 2 datasets

Motif DE_24h DE_24h-FOXF2_MA0030.2 9 bp overlap

Motif DE_36h DE_36h-FOXF2_MA0030.2 9 bp overlap

FOXG1 1 dataset

Motif DE_24h DE_24h-FOXG1_MA0613.1 8 bp overlap

FOXH1 1 dataset

Motif DE_24h DE_24h-FOXH1_MA0479.2 8 bp overlap

FOXK1 2 datasets

Motif DE_24h DE_24h-FOXK1_MA0852.3 7 bp overlap

Motif DE_36h DE_36h-FOXK1_MA0852.3 7 bp overlap

FOXK2 2 datasets

Motif DE_24h DE_24h-FOXK2_MA1103.3 7 bp overlap

Motif DE_36h DE_36h-FOXK2_MA1103.3 7 bp overlap

FOXL1 2 datasets

Motif DE_24h DE_24h-FOXL1_MA0033.2 7 bp overlap

Motif DE_36h DE_36h-FOXL1_MA0033.2 7 bp overlap

FOXL2 1 dataset

ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 212 bp overlap

FOXO4 2 datasets

Motif DE_24h DE_24h-FOXO4_MA0848.1 7 bp overlap

Motif DE_36h DE_36h-FOXO4_MA0848.1 7 bp overlap

FOXO6 2 datasets

Motif DE_24h DE_24h-FOXO6_MA0849.1 7 bp overlap

Motif DE_36h DE_36h-FOXO6_MA0849.1 7 bp overlap

FOXP2 2 datasets

Motif DE_24h DE_24h-FOXP2_MA0593.2 9 bp overlap

Motif DE_36h DE_36h-FOXP2_MA0593.2 9 bp overlap

FOXP3 2 datasets

Motif DE_24h DE_24h-FOXP3_MA0850.1 7 bp overlap

Motif DE_36h DE_36h-FOXP3_MA0850.1 7 bp overlap

Foxf1 2 datasets

Motif DE_24h DE_24h-Foxf1_MA1606.2 7 bp overlap

Motif DE_36h DE_36h-Foxf1_MA1606.2 7 bp overlap

Foxj2 1 dataset

Motif DE_24h DE_24h-Foxj2_MA0614.1 8 bp overlap

Foxl2 1 dataset

Motif DE_24h DE_24h-Foxl2_MA1607.2 10 bp overlap

Foxo1 2 datasets

Motif DE_24h DE_24h-Foxo1_MA0480.3 7 bp overlap

Motif DE_36h DE_36h-Foxo1_MA0480.3 7 bp overlap

Foxo3 2 datasets

Motif DE_24h DE_24h-Foxo3_MA0157.4 7 bp overlap

Motif DE_36h DE_36h-Foxo3_MA0157.4 7 bp overlap

Foxq1 1 dataset

Motif DE_24h DE_24h-Foxq1_MA0040.2 10 bp overlap

GATA1 3 datasets

ChIP K-562 GSE107726.GATA1.K-562 244 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 260 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 253 bp overlap

GATA1::TAL1 1 dataset

Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap

GATA2 4 datasets

ChIP LNCaP GSE38391.GATA2.LNCaP 190 bp overlap

ChIP LNCaP GSE52725.GATA2.LNCaP 190 bp overlap

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 183 bp overlap

GATA3 1 dataset

ChIP NGP GSE65664.GATA3.NGP 247 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 229 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 199 bp overlap

GATA5 1 dataset

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

GATA6 7 datasets

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 449 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 401 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 441 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 279 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 457 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 457 bp overlap

Gata3 1 dataset

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

HAND2 1 dataset

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 285 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap

HIF1A 1 dataset

ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 308 bp overlap

HLF 1 dataset

Motif DE_36h DE_36h-HLF_MA0043.4 9 bp overlap

Hand1 1 dataset

Motif DE_24h DE_24h-Hand1_MA2123.1 9 bp overlap

IRF2 1 dataset

Motif DE_24h DE_24h-IRF2_MA0051.2 16 bp overlap

IRF7 1 dataset

Motif DE_24h DE_24h-IRF7_MA0772.2 13 bp overlap

Irf1 1 dataset

Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap

JUN 3 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 292 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 457 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 340 bp overlap

MAF1 1 dataset

ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 205 bp overlap

MAX 4 datasets

ChIP H1 ENCFF914VQY 304 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 457 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 350 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 58 bp overlap

MYC 5 datasets

ChIP NCI-H128 GSE41105.MYC.NCI-H128 212 bp overlap

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 269 bp overlap

ChIP U2OS_Doxy GSE77328.MYC.U2OS_Doxy 219 bp overlap

ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 81 bp overlap

ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 107 bp overlap

MYCN 3 datasets

ChIP CHP-134 GSE129588.MYCN.CHP-134 276 bp overlap

ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 152 bp overlap

ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 207 bp overlap

MYOG 1 dataset

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 182 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 329 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 234 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 196 bp overlap

NFIC 1 dataset

ChIP HepG2 ENCFF169TKU 87 bp overlap

NFIL3 1 dataset

Motif DE_36h DE_36h-NFIL3_MA0025.3 9 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 319 bp overlap

PAX6 1 dataset

ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 276 bp overlap

PDX1 1 dataset

ChIP islet ERP001456.PDX1.islet 288 bp overlap

POU1F1 1 dataset

Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap

POU2F2 1 dataset

Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 286 bp overlap

POU3F1 1 dataset

Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap

POU5F1 2 datasets

Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 324 bp overlap

POU5F1B 1 dataset

Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 298 bp overlap

PRDM9 1 dataset

Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap

RBPJ 1 dataset

Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap

REST 1 dataset

Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap

RUVBL2 1 dataset

ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 291 bp overlap

Runx1 1 dataset

Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap

SMAD2 1 dataset

Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 397 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 222 bp overlap

SMARCA4 2 datasets

ChIP NGP GSE134626.SMARCA4.NGP 457 bp overlap

ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 308 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 210 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 214 bp overlap

SP1 1 dataset

Motif DE_36h DE_36h-SP1_MA0079.5 9 bp overlap

SP4 1 dataset

Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap

SP5 2 datasets

Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap

Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap

STAT1::STAT2 1 dataset

Motif DE_24h DE_24h-STAT1STAT2_MA0517.2 13 bp overlap

STAT3 2 datasets

ChIP HCC1187 GSE152203.STAT3.HCC1187 65 bp overlap

ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 271 bp overlap

Stat2 1 dataset

Motif DE_24h DE_24h-Stat2_MA1623.2 10 bp overlap

TERF1 1 dataset

ChIP LCL GSE55053.TERF1.LCL 210 bp overlap

TRPS1 1 dataset

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

ZFP14 1 dataset

Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap

ZFP42 1 dataset

Motif DE_24h DE_24h-ZFP42_MA1651.2 13 bp overlap

ZKSCAN5 1 dataset

Motif DE_24h DE_24h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF143 2 datasets

ChIP HeLa GSE39263.ZNF143.HeLa 102 bp overlap

ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap

ZNF263 1 dataset

Motif DE_36h DE_36h-ZNF263_MA0528.3 7 bp overlap

ZNF283 1 dataset

ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap

ZNF496 1 dataset

ChIP HEK293T GSE78099.ZNF496.HEK293T 260 bp overlap

ZNF75A 1 dataset

Motif DE_24h DE_24h-ZNF75A_MA2097.1 12 bp overlap

ZNF766 1 dataset

Motif DE_24h DE_24h-ZNF766_MA2098.1 9 bp overlap

Zfp809 1 dataset

Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap