chr2 : 120,216,352 120,216,602
250 bp 106 TFs 2 linked genes
This 250 bp open chromatin element is linked to ENSG00000224789 and TMEM185B and is bound by 106 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000224789 at TSS At TSS Proximity
TMEM185B 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:120,211,352 – 120,221,602
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 238 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 173 bp overlap
ATF6 2 datasets
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Motif DE_24h DE_24h-ATF6_MA1466.2 13 bp overlap
ATXN7L3 1 dataset
ChIP HCT-116_thaps GSE121798.ATXN7L3.HCT-116_thaps 179 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 201 bp overlap
BRD2 4 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 213 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 245 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 165 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 154 bp overlap
BRD4 6 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 89 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 212 bp overlap
ChIP SUM229PE_neg_DMSO_24h GSE87418.BRD4.SUM229PE_neg_DMSO_24h 249 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 77 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 65 bp overlap
ChIP hESC GSE33281.BRD4.hESC 109 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 250 bp overlap
CDX2 1 dataset
ChIP LS180_125 GSE31939.CDX2.LS180_125 61 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 92 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 169 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 234 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 175 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 223 bp overlap
ESR1 2 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 220 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 217 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 182 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 249 bp overlap
FOXO1::ELK1 3 datasets
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap
GATA6 2 datasets
ChIP OACP4-C GSE132680.GATA6.OACP4-C 250 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 152 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 100 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 219 bp overlap
IKZF1 3 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF5 4 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 250 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 119 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 250 bp overlap
ChIP YCC-3 GSE51705.KLF5.YCC-3 128 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 166 bp overlap
MAX 1 dataset
ChIP HCT116 ENCFF810LEN 250 bp overlap
MED1 1 dataset
ChIP HCT-116 GSE121798.MED1.HCT-116 78 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 250 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 244 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 109 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 139 bp overlap
NCBP1 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NCBP1.DLD-1_NELFCD-AID 232 bp overlap
NELFCD 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 250 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.NELFCD.DLD-1_NELFCD-AID_treated 157 bp overlap
NELFE 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.NELFE.DLD-1_NELFCD-AID 231 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.NELFE.DLD-1_NELFE-AID 166 bp overlap
ChIP HCT-116 GSE132705.NELFE.HCT-116 168 bp overlap
ChIP HCT-116_KAP1-KO GSE132705.NELFE.HCT-116_KAP1-KO 187 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 217 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 180 bp overlap
NRF1 4 datasets
ChIP H1 ENCFF582PEJ 197 bp overlap
ChIP HCT-116_D4_NonT GSE152144.NRF1.HCT-116_D4_NonT 117 bp overlap
ChIP HCT-116_H1_NonT GSE152144.NRF1.HCT-116_H1_NonT 216 bp overlap
ChIP WA01 ENCSR000ECC.NRF1.WA01 160 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 250 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 250 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 250 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 250 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 240 bp overlap
PAX5 1 dataset
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 175 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 250 bp overlap
ChIP HCT116 ENCFF508RDJ 234 bp overlap
ChIP HCT116 ENCFF849NGT 250 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 157 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 211 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 250 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RAD21 2 datasets
ChIP GP5D GSE51234.RAD21.GP5D 82 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 195 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 241 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 225 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 234 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 148 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SIN3A 1 dataset
ChIP HCT116 ENCFF203YBB 250 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 250 bp overlap
SMAD3 2 datasets
ChIP H69_4Veh GSE145250.SMAD3.H69_4Veh 57 bp overlap
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 84 bp overlap
SMC1 1 dataset
ChIP HCT-116 GSE131606.SMC1.HCT-116 209 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 71 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 188 bp overlap
SP1 2 datasets
ChIP HCT116 ENCFF800LBN 250 bp overlap
ChIP WTC11 ENCFF688PEU 250 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 250 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 211 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 249 bp overlap
SUPT5H 9 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 250 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 239 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 202 bp overlap
ChIP DLD-1_NELFE-AID_treated GSE144786.SUPT5H.DLD-1_NELFE-AID_treated 192 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 206 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 169 bp overlap
ChIP HCT-116_Nut3 GSE138548.SUPT5H.HCT-116_Nut3 214 bp overlap
ChIP HCT-116_Nut3_pThr806 GSE138548.SUPT5H.HCT-116_Nut3_pThr806 139 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 234 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 250 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 122 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 210 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 125 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 250 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 175 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 236 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 136 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 170 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 162 bp overlap
XBP1 2 datasets
Motif DE_12h DE_12h-XBP1_MA0844.2 11 bp overlap
Motif DE_24h DE_24h-XBP1_MA0844.2 11 bp overlap
XRN2 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.XRN2.DLD-1_NELFCD-AID_treated 151 bp overlap
YY1 2 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 183 bp overlap
ChIP HCT116 ENCFF497ZQZ 154 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB33 1 dataset
ChIP HCT116 ENCFF847AJN 181 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 242 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 250 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 206 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFX 3 datasets
ChIP HCT-116 GSE102616.ZFX.HCT-116 250 bp overlap
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 250 bp overlap
ChIP HCT116 ENCFF324IZY 250 bp overlap
ZNF257 3 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Zfx 3 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif DE_24h DE_24h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap