chr1 : 35,573,984 35,574,378
394 bp 87 TFs 2 linked genes
This 394 bp open chromatin element is linked to TFAP2E and TFAP2E-AS1 and is bound by 87 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
TFAP2E 671 bp At TSS Proximity
TFAP2E-AS1 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:35,568,984 – 35,579,378
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 216 bp overlap
ATXN7L3 1 dataset
ChIP HCT-116_thaps GSE121798.ATXN7L3.HCT-116_thaps 394 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 163 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 394 bp overlap
BRD2 12 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 394 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 324 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 394 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 295 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 295 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 178 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 178 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 344 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 344 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 394 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 248 bp overlap
ChIP foreskin_NHM1-5 GSE94488.BRD2.foreskin_NHM1-5 284 bp overlap
BRD4 12 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 240 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 394 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 350 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 108 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 108 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 249 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 249 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 394 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 113 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 73 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 205 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 102 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 221 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 209 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 329 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 394 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 126 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 194 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 212 bp overlap
CTCF 5 datasets
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 394 bp overlap
ChIP lung_left_upper-lobe ENCSR027FSZ.CTCF.lung_left_upper-lobe 203 bp overlap
ChIP upper lobe of left lung ENCFF277NLT 380 bp overlap
ChIP upper lobe of left lung ENCFF645BXH 293 bp overlap
ChIP upper lobe of left lung ENCFF645BXH 331 bp overlap
CTCFL 2 datasets
ChIP K-562 GSE70764.CTCFL.K-562 286 bp overlap
ChIP delta-47 GSE70764.CTCFL.delta-47 394 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 153 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 394 bp overlap
E2F5 1 dataset
ChIP WTC11 ENCFF449LLF 111 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 160 bp overlap
ELF1 1 dataset
ChIP ME-1 GSE46044.ELF1.ME-1 250 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 394 bp overlap
ChIP K-562 GSE23730.ERG.K-562 340 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 293 bp overlap
EZH2 19 datasets
ChIP GM23338 ENCFF613YON 84 bp overlap
ChIP GM23338 ENCFF613YON 150 bp overlap
ChIP H1 ENCFF232NZA 394 bp overlap
ChIP astrocyte ENCFF365JTP 394 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 394 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 145 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 194 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 50 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 169 bp overlap
ChIP hESC GSE113817.EZH2.hESC 394 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 394 bp overlap
ChIP hepatocyte ENCFF118DKH 98 bp overlap
ChIP hepatocyte ENCFF552DZB 260 bp overlap
ChIP keratinocyte ENCFF070STK 71 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 296 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 61 bp overlap
ChIP neural cell ENCFF610EPB 129 bp overlap
ChIP neural progenitor cell ENCFF018MKA 394 bp overlap
ChIP neural progenitor cell ENCFF472NFV 394 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 126 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 381 bp overlap
GLIS2 2 datasets
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 363 bp overlap
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 394 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 266 bp overlap
HMGB1 1 dataset
ChIP HUVEC-C GSE98245.HMGB1.HUVEC-C 339 bp overlap
HNRNPC 1 dataset
ChIP Hep-G2 GSE120104.HNRNPC.Hep-G2 118 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 123 bp overlap
JARID2 5 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 394 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 194 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 394 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 394 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 394 bp overlap
JUN 2 datasets
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 152 bp overlap
ChIP WTC11 ENCFF172UDA 127 bp overlap
KAT7 1 dataset
ChIP WTC11 ENCFF581TPB 71 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 224 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 229 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 394 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 59 bp overlap
MED1 4 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 394 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 394 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 394 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 394 bp overlap
MED26 1 dataset
ChIP HCT-116 GSE121355.MED26.HCT-116 232 bp overlap
MITF 2 datasets
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 303 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 217 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 394 bp overlap
NANOG 1 dataset
ChIP WA01 ERP004238.NANOG.WA01 180 bp overlap
NCAPH2 2 datasets
ChIP HEK293 GSE97540.NCAPH2.HEK293 74 bp overlap
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 81 bp overlap
NELFE 2 datasets
ChIP HCT-116 GSE132705.NELFE.HCT-116 250 bp overlap
ChIP HCT-116_KAP1-KO GSE132705.NELFE.HCT-116_KAP1-KO 294 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 166 bp overlap
NIPBL 2 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 394 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 177 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 394 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 394 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 238 bp overlap
PCBP1 2 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 184 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 184 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 394 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 288 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 194 bp overlap
POU5F1 4 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 106 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 394 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 366 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 394 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 394 bp overlap
RAD21 2 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 163 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 58 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 176 bp overlap
RNF2 2 datasets
ChIP WA01 GSE104690.RNF2.WA01 394 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 217 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 394 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 394 bp overlap
RUNX1 2 datasets
ChIP H9_DOX-5_HA GSE137670.RUNX1.H9_DOX-5_HA 220 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 369 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 105 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 163 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 394 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 77 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 235 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 242 bp overlap
SMC1 3 datasets
ChIP DKO GSE131606.SMC1.DKO 52 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 221 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 70 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 394 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 394 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 265 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 394 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 122 bp overlap
SUZ12 5 datasets
ChIP H1 ENCFF507HGF 169 bp overlap
ChIP H1 ENCFF881NFR 394 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 394 bp overlap
ChIP NT2/D1 ENCFF574SXS 133 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 303 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 195 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 90 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 90 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 394 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 126 bp overlap
TCF7 2 datasets
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 122 bp overlap
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 199 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 173 bp overlap
TEAD4 3 datasets
ChIP BJ_fibroblast_CD13-pos GSE114367.TEAD4.BJ_fibroblast_CD13-pos 305 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 98 bp overlap
ChIP H1 ENCFF778PAX 196 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 166 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 101 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 252 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 243 bp overlap
TP63 2 datasets
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 168 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 154 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 394 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 394 bp overlap
YY1 3 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 167 bp overlap
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 103 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 155 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 222 bp overlap
ZFX 5 datasets
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 394 bp overlap
ChIP HCT-116 GSE102616.ZFX.HCT-116 394 bp overlap
ChIP HCT116 ENCFF324IZY 331 bp overlap
ChIP HCT116 ENCFF324IZY 193 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 394 bp overlap
ZNF302 1 dataset
ChIP HEK293T GSE78099.ZNF302.HEK293T 87 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 394 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 162 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 97 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 272 bp overlap