chr2 : 70,938,982 70,939,384
402 bp 91 TFs 1 linked gene
This 402 bp open chromatin element is linked to ATP6V1B1-AS1 and is bound by 91 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ATP6V1B1-AS1 9.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:70,933,982 – 70,944,384
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 234 bp overlap
AGO1 3 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 318 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 349 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 181 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 402 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 147 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 402 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 402 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 402 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 95 bp overlap
BRD4 9 datasets
ChIP 402-91 GSE111253.BRD4.402-91 239 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 155 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 144 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 301 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 139 bp overlap
ChIP hESC GSE33281.BRD4.hESC 67 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 402 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 354 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 402 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 255 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 402 bp overlap
ChIP H1 ENCFF329MAX 321 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 402 bp overlap
CTCF 5 datasets
ChIP K-562 ENCSR000BPJ.CTCF.K-562 117 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 218 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 388 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 187 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 182 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 179 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 187 bp overlap
ESR1 19 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 258 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 133 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 324 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 373 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 396 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 314 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 126 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 224 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 402 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 402 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 399 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 398 bp overlap
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 249 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 261 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 264 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 352 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 381 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 382 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 392 bp overlap
EZH2 5 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 239 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 60 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 221 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 174 bp overlap
ChIP neural progenitor cell ENCFF018MKA 402 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 265 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 402 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 206 bp overlap
HNRNPL 4 datasets
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 177 bp overlap
ChIP HepG2 ENCFF671UYF 99 bp overlap
ChIP HepG2 ENCFF684GAM 99 bp overlap
ChIP HepG2 ENCFF684GAM 303 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 172 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 172 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 296 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 383 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 402 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 377 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 306 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 229 bp overlap
JUNB 2 datasets
ChIP GM23338 ENCFF224LRO 190 bp overlap
ChIP hESC ENCSR917MAH.JUNB.hESC 230 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KDM4A 5 datasets
ChIP H1 ENCFF078LED 402 bp overlap
ChIP H1 ENCFF078LED 402 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 402 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 167 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 264 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 285 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 130 bp overlap
ChIP WTC11 ENCFF223QFY 402 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 330 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 402 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 386 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 244 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 143 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 322 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 367 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 251 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 250 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 158 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 366 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 349 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 318 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 290 bp overlap
PATZ1 1 dataset
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 402 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 276 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 269 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 303 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 250 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 268 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 402 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 314 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 306 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 402 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 358 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 348 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 73 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 248 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 308 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 202 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 106 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 355 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 348 bp overlap
RNF2 3 datasets
ChIP WA01 GSE104690.RNF2.WA01 402 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 71 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 402 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 402 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 361 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 243 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 209 bp overlap
RYBP 2 datasets
ChIP WA01 GSE104690.RYBP.WA01 166 bp overlap
ChIP WA01 GSE104690.RYBP.WA01 166 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 348 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF896IJG 284 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 286 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 162 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 309 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 377 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 371 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 285 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 402 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 374 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 332 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 261 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 326 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 218 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 222 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 383 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 272 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 373 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 298 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 243 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 181 bp overlap
SP5 2 datasets
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 308 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 280 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 175 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 327 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 243 bp overlap
STAT5B 1 dataset
ChIP CD8_H9RET GSE64713.STAT5B.CD8_H9RET 203 bp overlap
SUZ12 4 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 354 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 178 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 320 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 332 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 197 bp overlap
TARDBP 2 datasets
ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 180 bp overlap
ChIP Hep-G2 GSE120104.TARDBP.Hep-G2 152 bp overlap
TCF12 3 datasets
ChIP Ishikawa ENCFF467DDW 402 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 296 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 207 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 347 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 315 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 265 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 277 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 192 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 241 bp overlap
ZBTB7A 1 dataset
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 216 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 402 bp overlap
ZMYM3 1 dataset
ChIP HepG2 ENCFF408KTI 126 bp overlap
ZNF135 1 dataset
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF257 1 dataset
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF281 2 datasets
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ChIP HepG2 ENCFF585QNU 325 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF460 1 dataset
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 159 bp overlap
ZNF629 1 dataset
ChIP HepG2 ENCFF490FFQ 54 bp overlap