chr2 : 9,245,194 9,245,411
217 bp 92 TFs 0 linked genes
This 217 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:9,240,194 – 9,250,411
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 217 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 112 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 217 bp overlap
ATF1 2 datasets
ChIP K-562 ENCSR091GVJ.ATF1.K-562 217 bp overlap
ChIP K562 ENCFF817JQF 217 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF066HPG 176 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 51 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 198 bp overlap
ChIP K562 ENCFF604FPV 96 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 97 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 148 bp overlap
BATF3 2 datasets
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 217 bp overlap
ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 217 bp overlap
BRD2 6 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 185 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 217 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 217 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 89 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 94 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 121 bp overlap
BRD4 12 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 217 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 186 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 217 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 217 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 172 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 217 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 217 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 217 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 201 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 217 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 180 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 217 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 217 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 133 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 190 bp overlap
CDX2 2 datasets
ChIP LS180_125 GSE31939.CDX2.LS180_125 181 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 191 bp overlap
CREB1 6 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 184 bp overlap
ChIP MCF-7 ENCFF341ZEM 129 bp overlap
ChIP MCF-7 ENCFF867SAS 117 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 96 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 81 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 170 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 86 bp overlap
EGR1 2 datasets
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
ChIP H1 ENCFF451BLH 217 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 217 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 201 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 217 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 50 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 85 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 217 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 104 bp overlap
FOXA1 6 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 217 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 217 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 217 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 217 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 217 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 217 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 217 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 217 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 59 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 217 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 217 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 217 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 174 bp overlap
GATA6 1 dataset
ChIP OACP4-C GSE132680.GATA6.OACP4-C 217 bp overlap
GRHL2 2 datasets
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 120 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 162 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 140 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 217 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 108 bp overlap
HOXB8 2 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 217 bp overlap
ChIP PANC-1 GSE119930.HOXB8.PANC-1 217 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 217 bp overlap
JUN 5 datasets
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 188 bp overlap
ChIP MCF-7_TamR_BD610326 GSE128445.JUN.MCF-7_TamR_BD610326 191 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 195 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 191 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 160 bp overlap
JUNB 3 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 217 bp overlap
ChIP HAEC GSE89970.JUNB.HAEC 153 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 217 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 114 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 3 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 197 bp overlap
ChIP PDAC GSE64557.KLF4.PDAC 217 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 217 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 203 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 217 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 197 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 217 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 217 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 178 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 98 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 217 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 217 bp overlap
POLR2A 1 dataset
ChIP transverse colon ENCFF610RWV 67 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 186 bp overlap
ChIP H1 ENCFF698ZAP 181 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 217 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 217 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 217 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 176 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 123 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 101 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 185 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 217 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 140 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 172 bp overlap
SMAD3 3 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 217 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 217 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 217 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 139 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 181 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 217 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 147 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 161 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 217 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 217 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 217 bp overlap
ChIP H1 ENCFF263FUH 109 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 91 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
STAT3 15 datasets
ChIP FaDu_DMSO GSE78212.STAT3.FaDu_DMSO 217 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 52 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 63 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 59 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 77 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 156 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 114 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 217 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 217 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 217 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 60 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 217 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 217 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 91 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 75 bp overlap
STAT5B 2 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 114 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 169 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 149 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 180 bp overlap
TCF7L2 1 dataset
ChIP Panc1 ENCFF829HHL 199 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 217 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 212 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 160 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ChIP PDAC GSE64557.ZEB1.PDAC 217 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 167 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 73 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 183 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap