chr18 : 48,915,841 48,916,219
378 bp 87 TFs 0 linked genes
This 378 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:48,910,841 – 48,921,219
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 148 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 55 bp overlap
ATF3 4 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 321 bp overlap
ChIP K-562 ENCSR632DCH.ATF3.K-562 215 bp overlap
ChIP K562 ENCFF604FPV 376 bp overlap
ChIP K562 ENCFF921JQW 378 bp overlap
BRD4 6 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 150 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 172 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 272 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 155 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 238 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 194 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 257 bp overlap
ChIP K562 ENCFF673OEZ 336 bp overlap
CEBPA 4 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 378 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 164 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 59 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 190 bp overlap
CEBPB 4 datasets
ChIP HL-60_CEBPB_overexpressed GSE100486.CEBPB.HL-60_CEBPB_overexpressed 150 bp overlap
ChIP HeLa-S3 ENCFF722WEG 253 bp overlap
ChIP IMR-90 ENCFF468UGY 251 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 378 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 107 bp overlap
CEBPG 3 datasets
ChIP K-562 ENCSR490LWA.CEBPG.K-562 240 bp overlap
ChIP K-562 ENCSR620VIC.CEBPG.K-562 195 bp overlap
ChIP K562 ENCFF783ADE 171 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 188 bp overlap
CTBP2 1 dataset
ChIP MCF-7 GSE107013.CTBP2.MCF-7 121 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 258 bp overlap
ChIP BLaER1 ENCFF093OYK 281 bp overlap
ChIP BLaER1 ENCFF274GAT 230 bp overlap
ChIP BLaER1 ENCFF896HSY 135 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 106 bp overlap
EP300 3 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 124 bp overlap
ChIP SK-N-SH ENCFF829RWA 319 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 148 bp overlap
ESR1 8 datasets
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 263 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 105 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 130 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 181 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 265 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 236 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 264 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 150 bp overlap
ESRRA 1 dataset
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 322 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 99 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 194 bp overlap
GATA1 6 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 155 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 296 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 202 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 270 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 205 bp overlap
ChIP K562 ENCFF094CMK 243 bp overlap
GATA2 16 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 328 bp overlap
ChIP ESF GSE108408.GATA2.ESF 162 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 358 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 125 bp overlap
ChIP K562 ENCFF544PCK 240 bp overlap
ChIP K562 ENCFF830LLA 378 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 144 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 312 bp overlap
ChIP SH-SY5Y ENCFF485YIB 315 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 294 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 190 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 265 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 235 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 226 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 276 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 230 bp overlap
GATA3 6 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 149 bp overlap
ChIP A549 ENCFF226FVV 315 bp overlap
ChIP MCF-7 ENCFF352QVM 340 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 154 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 142 bp overlap
ChIP SK-N-SH ENCFF040SSB 184 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 273 bp overlap
ChIP DE DE-GATA4-1 282 bp overlap
ChIP DE DE-GATA4-2 329 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 315 bp overlap
ChIP foregut GSE117136.GATA4.foregut 322 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 264 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 354 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 229 bp overlap
ChIP DE DE-GATA6-1 267 bp overlap
ChIP DE DE-GATA6-2 294 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 325 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 282 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 218 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 216 bp overlap
ChIP foregut GSE117136.GATA6.foregut 356 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 237 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 284 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 220 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 299 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 316 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 56 bp overlap
ChIP K562 ENCFF968WBH 354 bp overlap
ChIP NB4 GSE126720.HDAC1.NB4 162 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 290 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 108 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 262 bp overlap
IFNA1 1 dataset
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 238 bp overlap
IRF4 1 dataset
ChIP U266 GSE142493.IRF4.U266 126 bp overlap
JMJD1C 2 datasets
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 203 bp overlap
ChIP NB4 GSE63484.JMJD1C.NB4 241 bp overlap
KDM1A 6 datasets
ChIP K-562 GSE117944.KDM1A.K-562 219 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 208 bp overlap
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 92 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 252 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 197 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 259 bp overlap
KLF16 1 dataset
ChIP K-562 ENCSR760UVO.KLF16.K-562 166 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 190 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 151 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 176 bp overlap
LYL1 2 datasets
ChIP Kasumi-1 GSE63484.LYL1.Kasumi-1 156 bp overlap
ChIP NB4 GSE63484.LYL1.NB4 150 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 271 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 291 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 140 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 179 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 162 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 279 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 378 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 267 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 260 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 378 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 128 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 228 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 175 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 336 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 134 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 157 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 177 bp overlap
POLR2A 1 dataset
ChIP HL-60 ENCFF321XKE 155 bp overlap
RAD21 1 dataset
ChIP MDM GSE103477.RAD21.MDM 78 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 284 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 185 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 339 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 253 bp overlap
RUNX1 4 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 235 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 235 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 378 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 152 bp overlap
RUNX1T1 3 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 378 bp overlap
ChIP Kasumi-1_shControl-AE GSE115115.RUNX1T1.Kasumi-1_shControl-AE 271 bp overlap
ChIP Kasumi-1_shTAF1-AE GSE115115.RUNX1T1.Kasumi-1_shTAF1-AE 344 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 199 bp overlap
SKI 2 datasets
ChIP HL-60 GSE107553.SKI.HL-60 272 bp overlap
ChIP HL-60_CRISPRCas9_ctrl GSE107553.SKI.HL-60_CRISPRCas9_ctrl 352 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 378 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 105 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 286 bp overlap
SPI1 1 dataset
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 155 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 149 bp overlap
SUPT5H 1 dataset
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 103 bp overlap
TAL1 3 datasets
ChIP K-562 GSE107726.TAL1.K-562 175 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 236 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 220 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 306 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 307 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 135 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 378 bp overlap
TEAD1 2 datasets
ChIP K-562 ENCSR591ASD.TEAD1.K-562 199 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap
TEAD4 2 datasets
ChIP K562 ENCFF673NIK 327 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 159 bp overlap
USF2 1 dataset
ChIP HeLa-S3 ENCSR000ECW.USF2.HeLa-S3 98 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 378 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 354 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 359 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 354 bp overlap
ZNF600 2 datasets
ChIP HEK293 ENCFF785JSX 248 bp overlap
ChIP HEK293 ENCFF785JSX 378 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 167 bp overlap
ChIP HepG2 ENCFF490FFQ 227 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 255 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 187 bp overlap