chr17 : 68,591,587 68,592,054
467 bp 95 TFs 2 linked genes
This 467 bp open chromatin element is linked to LINC01482 and FAM20A and is bound by 95 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
LINC01482 at TSS At TSS Proximity
FAM20A 9.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:68,586,587 – 68,597,054
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
Ahr::Arnt 4 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 269 bp overlap
BRD3 3 datasets
ChIP U-87MG_GBM GSE99171.BRD3.U-87MG_GBM 311 bp overlap
ChIP U-87MG_GBM_dBET6_1d GSE99171.BRD3.U-87MG_GBM_dBET6_1d 303 bp overlap
ChIP U-87MG_GBM_dBET6_2h GSE99171.BRD3.U-87MG_GBM_dBET6_2h 291 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 167 bp overlap
CXXC5 2 datasets
ChIP K562 ENCFF497CZN 412 bp overlap
ChIP prostate-cancer GSE136128.CXXC5.prostate-cancer 145 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 262 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 129 bp overlap
DIDO1 1 dataset
ChIP K-562 ENCSR167JBG.DIDO1.K-562 168 bp overlap
E2F1 2 datasets
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 213 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 223 bp overlap
E2F4 2 datasets
ChIP K-562 ENCSR000EWL.E2F4.K-562 131 bp overlap
ChIP MCF-7_TAM GSE41561.E2F4.MCF-7_TAM 252 bp overlap
E2F6 4 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 146 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 219 bp overlap
E2F7 2 datasets
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
Motif DE_24h DE_24h-E2F7_MA0758.1 14 bp overlap
E2F8 2 datasets
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap
ESRRA 5 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 467 bp overlap
ChIP K562 ENCFF968PEP 248 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 222 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 241 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 357 bp overlap
ESRRB 2 datasets
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
Motif DE_24h DE_24h-ESRRB_MA0141.4 10 bp overlap
Esrrg 2 datasets
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
Motif DE_24h DE_24h-Esrrg_MA0643.2 9 bp overlap
FOXJ2::ELF1 2 datasets
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_24h DE_24h-FOXJ2ELF1_MA1952.2 11 bp overlap
GABPA 2 datasets
ChIP K562 ENCFF139LXS 467 bp overlap
ChIP K562 ENCFF139LXS 391 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF015GDS 467 bp overlap
GATA1::TAL1 2 datasets
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
Motif ES_0h ES_0h-GATA1TAL1_MA0140.3 17 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
IKZF1 4 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 312 bp overlap
ChIP K562 ENCFF771OHZ 467 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 263 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 103 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 4 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 401 bp overlap
ChIP K562 ENCFF320EQC 467 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 312 bp overlap
ChIP K562 ENCFF320GSD 189 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 326 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 392 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 294 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 158 bp overlap
NR2C1 7 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif DE_24h DE_24h-NR2C1_MA1535.2 6 bp overlap
Motif DE_24h DE_24h-NR2C1_MA1535.2 6 bp overlap
ChIP K-562 ENCSR742IDN.NR2C1.K-562 244 bp overlap
ChIP K562 ENCFF239KMA 467 bp overlap
ChIP K562 ENCFF568JLK 356 bp overlap
NR2C2 6 datasets
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif DE_24h DE_24h-NR2C2_MA1536.2 6 bp overlap
Motif DE_24h DE_24h-NR2C2_MA1536.2 6 bp overlap
ChIP K562 ENCFF750AXF 467 bp overlap
ChIP K562 ENCFF750AXF 467 bp overlap
NR2F2 2 datasets
Motif DE_12h DE_12h-NR2F2_MA1111.2 7 bp overlap
Motif DE_24h DE_24h-NR2F2_MA1111.2 7 bp overlap
NR4A1 2 datasets
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Motif DE_24h DE_24h-NR4A1_MA1112.3 8 bp overlap
NR4A2 2 datasets
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
Motif DE_24h DE_24h-NR4A2_MA0160.3 8 bp overlap
NR5A1 2 datasets
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Motif DE_24h DE_24h-NR5A1_MA1540.3 12 bp overlap
NRF1 21 datasets
ChIP H1 ENCFF582PEJ 245 bp overlap
ChIP HCC1954 GSE67867.NRF1.HCC1954 110 bp overlap
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 162 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 467 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 467 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 396 bp overlap
ChIP K-562 ENCSR000EHH.NRF1.K-562 212 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 388 bp overlap
ChIP K-562_Ab_R157-1-3H1 GSE97661.NRF1.K-562_Ab_R157-1-3H1 248 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 383 bp overlap
ChIP K562 ENCFF130SGK 379 bp overlap
ChIP K562 ENCFF689EWI 467 bp overlap
ChIP K562 ENCFF773FOM 241 bp overlap
ChIP K562 ENCFF791UHF 467 bp overlap
ChIP MCF-7 ENCFF148IMD 103 bp overlap
ChIP MCF-7 ENCSR135ANT.NRF1.MCF-7 206 bp overlap
ChIP MCF-7_Ab_R157-1-3D4 GSE97661.NRF1.MCF-7_Ab_R157-1-3D4 300 bp overlap
ChIP MCF-7_Ab_R157-1-3H1 GSE97661.NRF1.MCF-7_Ab_R157-1-3H1 179 bp overlap
ChIP Namalwa GSE53133.NRF1.Namalwa 333 bp overlap
ChIP T-47D_HAEGIN2 GSE59935.NRF1.T-47D_HAEGIN2 303 bp overlap
ChIP WA01 ENCSR000ECC.NRF1.WA01 188 bp overlap
Nr1H2 4 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_24h DE_24h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_24h DE_24h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 4 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_24h DE_24h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_24h DE_24h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 4 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_24h DE_24h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_24h DE_24h-Nr1h3_MA2337.1 6 bp overlap
Nrf1 2 datasets
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
Motif DE_24h DE_24h-Nrf1_MA0506.3 12 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PAF1 2 datasets
ChIP HepG2 ENCFF949UAN 303 bp overlap
ChIP HepG2 ENCFF949UAN 299 bp overlap
PAX8 1 dataset
ChIP OVSAHO GSE79893.PAX8.OVSAHO 60 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 254 bp overlap
POLR2A 5 datasets
ChIP GM23338 ENCFF450WCS 462 bp overlap
ChIP H54 ENCFF398BXN 259 bp overlap
ChIP HeLa-S3 ENCFF224LWS 467 bp overlap
ChIP spleen ENCFF446ZGT 305 bp overlap
ChIP spleen ENCFF706IUS 228 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 232 bp overlap
Ppara 2 datasets
Motif DE_12h DE_12h-Ppara_MA2338.1 7 bp overlap
Motif DE_24h DE_24h-Ppara_MA2338.1 7 bp overlap
RBFOX2 1 dataset
ChIP K-562 GSE120104.RBFOX2.K-562 184 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RXRG 2 datasets
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
Motif DE_24h DE_24h-RXRG_MA1556.1 14 bp overlap
SMAD3 1 dataset
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 150 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
SP2 2 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
ChIP HEK293 ENCSR141PZA.SP3.HEK293 196 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 5 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 170 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 190 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 464 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 273 bp overlap
TET2 1 dataset
ChIP prostate-cancer GSE136128.TET2.prostate-cancer 133 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 1 dataset
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
TFAP4 2 datasets
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
ChIP K562 ENCFF727PXG 215 bp overlap
TFDP1 2 datasets
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
Motif DE_24h DE_24h-TFDP1_MA1122.2 8 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Thap11 2 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 167 bp overlap
VEZF1 2 datasets
ChIP K562 ENCFF053XDV 467 bp overlap
ChIP K562 ENCFF053XDV 371 bp overlap
ZBTB2 2 datasets
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 276 bp overlap
ChIP K562 ENCFF290ESQ 366 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 78 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
ZNF189 2 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif DE_24h DE_24h-ZNF189_MA1725.2 9 bp overlap
ZNF263 4 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
Motif DE_24h DE_24h-ZNF263_MA0528.3 7 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ZNF324 1 dataset
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 377 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 240 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
ZNF639 2 datasets
ChIP K-562 ENCSR949NVY.ZNF639.K-562 346 bp overlap
ChIP K562 ENCFF267NLX 351 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 62 bp overlap
ZNF740 2 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif DE_24h DE_24h-ZNF770_MA2099.1 8 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif DE_24h DE_24h-ZNF85_MA1720.2 12 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 368 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap