chr16 : 65,728,143 65,728,583
440 bp 94 TFs 0 linked genes
This 440 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:65,723,143 – 65,733,583
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 5 datasets
ChIP prostate GSE56288.AR.prostate 201 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 209 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 213 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 250 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 253 bp overlap
BRD4 5 datasets
ChIP SW480 GSE110473.BRD4.SW480 417 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 257 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 327 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 256 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CDK8 1 dataset
ChIP SW480 GSE53602.CDK8.SW480 210 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 301 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 214 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 387 bp overlap
CTCF 4 datasets
ChIP GP5D GSE51234.CTCF.GP5D 92 bp overlap
ChIP H9 ENCFF152GTF 52 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 300 bp overlap
ChIP neural progenitor cell ENCFF581WPG 284 bp overlap
CTNNB1 2 datasets
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 168 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 382 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 304 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 80 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 154 bp overlap
ESR1 2 datasets
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 195 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 324 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 187 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 440 bp overlap
FOXA1 1 dataset
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 232 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 354 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
HAND2 2 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HNF4A 2 datasets
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 400 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
HOXA4 1 dataset
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
HOXB13 9 datasets
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 82 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 238 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 282 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 205 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 155 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 286 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 152 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 249 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 145 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC13 1 dataset
Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Hnf1A 3 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 190 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 182 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 225 bp overlap
KLF5 3 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 313 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 210 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 163 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MED1 1 dataset
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 233 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 124 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 355 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
NANOG 7 datasets
ChIP H1 ENCFF747ZPQ 211 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 440 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 395 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 160 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 402 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 227 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 334 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 159 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 389 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 304 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 345 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 227 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 286 bp overlap
PGR 2 datasets
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 217 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 316 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 381 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 381 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 229 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 178 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
PRDM15 2 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 126 bp overlap
ChIP WTC11 ENCFF108TMF 209 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 258 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 268 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 293 bp overlap
REST 2 datasets
ChIP WA01 ENCSR000BHM.REST.WA01 166 bp overlap
ChIP neural ENCSR000BTV.REST.neural 167 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 114 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 265 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 247 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 224 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 246 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 379 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 301 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 173 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 232 bp overlap
SOX10 3 datasets
ChIP 501-mel GSE61965.SOX10.501-mel 232 bp overlap
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 11 datasets
ChIP H9 GSE46837.SOX2.H9 156 bp overlap
ChIP HCC95 GSE137459.SOX2.HCC95 224 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 229 bp overlap
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 322 bp overlap
ChIP LK2 GSE137459.SOX2.LK2 309 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 361 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 440 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 364 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 243 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 250 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 300 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 373 bp overlap
SOX4 2 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 102 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 187 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 210 bp overlap
STAT3 3 datasets
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 191 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 343 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 213 bp overlap
Sox11 2 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox6 2 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 2 datasets
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TCF4 1 dataset
ChIP LS180 GSE31939.TCF4.LS180 92 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 3 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 375 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 239 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 195 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF274 1 dataset
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 394 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 257 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap