chr12 : 10,361,067 10,361,431
364 bp 87 TFs 1 linked gene
This 364 bp open chromatin element is linked to KLRK1-AS1 and is bound by 87 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KLRK1-AS1 6.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:10,356,067 – 10,366,431
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 170 bp overlap
BRD2 2 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 83 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 364 bp overlap
BRD3 3 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 105 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 133 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 195 bp overlap
BRD4 13 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 287 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 219 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 95 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 196 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 233 bp overlap
ChIP SUM159PT_DMSO GSE131097.BRD4.SUM159PT_DMSO 66 bp overlap
ChIP SUM159PT_DMSO GSE131097.BRD4.SUM159PT_DMSO 112 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 98 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 364 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 364 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 364 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 364 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 90 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
CREB3 1 dataset
ChIP K-562 ENCSR093FKD.CREB3.K-562 364 bp overlap
CTCF 4 datasets
ChIP HeLa-S3 ENCFF565UFR 153 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 305 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 289 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 152 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 189 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 364 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 197 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF006PJY 219 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 121 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 66 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 274 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 178 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 59 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 208 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 86 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 98 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 69 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 364 bp overlap
MAX 7 datasets
ChIP H1 ENCFF601FOM 281 bp overlap
ChIP H1 ENCFF914VQY 186 bp overlap
ChIP K562 ENCFF524IJO 292 bp overlap
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 189 bp overlap
ChIP NB4 ENCFF966MWB 259 bp overlap
ChIP NB4 ENCSR000EHS.MAX.NB4 117 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 320 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 349 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 297 bp overlap
ChIP K562 ENCFF140CEX 364 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 364 bp overlap
MYC 7 datasets
ChIP H1 ENCFF794ZJT 265 bp overlap
ChIP K-562 ENCSR000FAG.MYC.K-562 127 bp overlap
ChIP LNCaP GSE117430.MYC.LNCaP 207 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 298 bp overlap
ChIP NB4 ENCFF142PRP 273 bp overlap
ChIP NB4 ENCSR000EHR.MYC.NB4 142 bp overlap
ChIP P493-6_SHCTR GSE60223.MYC.P493-6_SHCTR 145 bp overlap
MYCN 4 datasets
ChIP 22Rv1_castrated GSE117304.MYCN.22Rv1_castrated 228 bp overlap
ChIP 22Rv1_intact GSE117304.MYCN.22Rv1_intact 364 bp overlap
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 239 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 217 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 215 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 132 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 294 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 214 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 217 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 227 bp overlap
NELFA 3 datasets
ChIP HeLa_1h-Flavo-0-H2O2 GSE93931.NELFA.HeLa_1h-Flavo-0-H2O2 150 bp overlap
ChIP HeLa_1h_Flavo-35min-H2O2 GSE93931.NELFA.HeLa_1h_Flavo-35min-H2O2 124 bp overlap
ChIP HeLa_Flavo-35min-H2O2 GSE100742.NELFA.HeLa_Flavo-35min-H2O2 230 bp overlap
NELFE 4 datasets
ChIP HeLa GSE125534.NELFE.HeLa 107 bp overlap
ChIP HeLa GSE125534.NELFE.HeLa 109 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 71 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 110 bp overlap
NFRKB 1 dataset
ChIP HEK293T ENCFF538OWZ 182 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 169 bp overlap
NUTM1 2 datasets
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 63 bp overlap
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 97 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 244 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 364 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 343 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 309 bp overlap
ChIP K562 ENCFF286KMN 148 bp overlap
PBX3 2 datasets
ChIP GM12878 ENCFF285BQQ 217 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 118 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 101 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 89 bp overlap
PKNOX1 8 datasets
ChIP GM12878 ENCFF589FCY 283 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 337 bp overlap
ChIP HEK293T ENCFF174WDB 360 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 360 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 364 bp overlap
ChIP K562 ENCFF236IUS 364 bp overlap
ChIP MCF-7 ENCFF116OCS 231 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 319 bp overlap
POLR2A 4 datasets
ChIP NB4 ENCFF780KAX 226 bp overlap
ChIP SK-N-MC ENCFF088IVG 261 bp overlap
ChIP SK-N-MC ENCFF088IVG 218 bp overlap
ChIP tibial nerve ENCFF983HAU 364 bp overlap
POU2F1 4 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 364 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 364 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 364 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 363 bp overlap
POU2F2 1 dataset
ChIP GM12878 ENCFF207RKY 321 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 321 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 289 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 286 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 271 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 308 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 161 bp overlap
RELA 7 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 364 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 344 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 316 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 204 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 211 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 364 bp overlap
ChIP K-562 ENCSR772EEN.RELA.K-562 304 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 61 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 342 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 287 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 85 bp overlap
SOX2 3 datasets
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 209 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 281 bp overlap
SP2 3 datasets
ChIP HEK293 ENCFF181QXT 226 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 299 bp overlap
ChIP HEK293T ERP007114.SP2.HEK293T 225 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 364 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 230 bp overlap
STAT3 2 datasets
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 74 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 100 bp overlap
SUPT5H 6 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 59 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 62 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 82 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 85 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 87 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 106 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 324 bp overlap
ChIP H1 ENCFF478SZO 326 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 119 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 274 bp overlap
ChIP hESC GSE122298.TBP.hESC 188 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 153 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 178 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 149 bp overlap
TP53 9 datasets
ChIP H9 GSE142050.TP53.H9 364 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 293 bp overlap
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 285 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 148 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 208 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 228 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 310 bp overlap
ChIP keratinocyte_ADRIA GSE56674.TP53.keratinocyte_ADRIA 216 bp overlap
ChIP keratinocyte_CISP GSE56674.TP53.keratinocyte_CISP 217 bp overlap
TP63 15 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 307 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 109 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 144 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 193 bp overlap
ChIP KYSE-70 GSE46837.TP63.KYSE-70 181 bp overlap
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 180 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 195 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 201 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 205 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 161 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 240 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 248 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 238 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 233 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 153 bp overlap
TSHZ1 1 dataset
ChIP HEK293 ENCFF893BGV 283 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 121 bp overlap
YY1 14 datasets
ChIP H1 ENCFF524BTL 285 bp overlap
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 119 bp overlap
ChIP HCT116 ENCFF497ZQZ 262 bp overlap
ChIP HEK293 ENCFF734SBY 242 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 364 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 364 bp overlap
ChIP Ishikawa ENCFF505XQX 288 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 152 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 183 bp overlap
ChIP K562 ENCFF660QRE 254 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 214 bp overlap
ChIP NT2/D1 ENCFF999MII 282 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 223 bp overlap
ChIP WA01 GSE39096.YY1.WA01 170 bp overlap
YY2 2 datasets
ChIP HEK293 ENCFF997QEP 313 bp overlap
ChIP HEK293 ENCSR692HSE.YY2.HEK293 268 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 125 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 222 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 354 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 364 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 236 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 328 bp overlap
ZNF320 1 dataset
ChIP HEK293 GSE76494.ZNF320.HEK293 273 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 52 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 364 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCFF481TFV 117 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 249 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 291 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 337 bp overlap
ChIP K562 ENCFF547OSS 364 bp overlap
ZNF7 1 dataset
ChIP K562 ENCFF096OHS 256 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 190 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 364 bp overlap