chr11 : 35,420,184 35,420,680
496 bp 83 TFs 2 linked genes
This 496 bp open chromatin element is linked to SLC1A2-AS2 and SLC1A2 and is bound by 83 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SLC1A2-AS2 1.1 kb Proximal Proximity
SLC1A2 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:35,415,184 – 35,425,680
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 436 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 150 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 122 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 306 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 405 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 496 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 242 bp overlap
BRD4 5 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 273 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 93 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 92 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 155 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 239 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 315 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 130 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 324 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 199 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 163 bp overlap
CTCF 2 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 96 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 164 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 496 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 246 bp overlap
EGR1 5 datasets
ChIP K-562 ENCSR024CNP.EGR1.K-562 200 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 139 bp overlap
ChIP K562 ENCFF006PJY 194 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 232 bp overlap
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 128 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 171 bp overlap
ELF1 2 datasets
ChIP A-549 GSE122203.ELF1.A-549 113 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 292 bp overlap
ERG 2 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 119 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 134 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 69 bp overlap
EZH2 12 datasets
ChIP A673 ENCFF790MVL 496 bp overlap
ChIP A673 ENCFF955JRZ 496 bp overlap
ChIP H1 ENCFF232NZA 496 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 450 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 484 bp overlap
ChIP HepG2 ENCFF912EIW 408 bp overlap
ChIP HepG2 ENCFF912EIW 186 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 391 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 496 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 260 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 237 bp overlap
ChIP hepatocyte ENCFF552DZB 312 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 186 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 119 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 128 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 298 bp overlap
GTF3C5 1 dataset
ChIP IMR-5_CD532 GSE78957.GTF3C5.IMR-5_CD532 168 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 472 bp overlap
JARID2 6 datasets
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 251 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 277 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 330 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 496 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 50 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 371 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 57 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 96 bp overlap
KDM1A 3 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 159 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 280 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 470 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 235 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 125 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 358 bp overlap
MAX 4 datasets
ChIP H1 ENCFF914VQY 179 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 79 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 99 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 182 bp overlap
MBD2 1 dataset
ChIP HMLER GSE63233.MBD2.HMLER 238 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 177 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 363 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 365 bp overlap
MYC 1 dataset
ChIP SK-N-SH GSE138295.MYC.SK-N-SH 165 bp overlap
MYCN 8 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 469 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 109 bp overlap
ChIP Kelly GSE80151.MYCN.Kelly 115 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 208 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 184 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 169 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 57 bp overlap
ChIP NGP GSE80151.MYCN.NGP 135 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 173 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 208 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 214 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 183 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 221 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 128 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 248 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 155 bp overlap
POU5F1 6 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 289 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 304 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 379 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 386 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 145 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 156 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 111 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 384 bp overlap
ChIP H1 ENCFF905HFL 496 bp overlap
RNF2 4 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 496 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 234 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 332 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 105 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 57 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 327 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 285 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 101 bp overlap
SMARCA4 5 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 277 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 231 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 280 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 223 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 122 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 138 bp overlap
SP2 1 dataset
ChIP HEK293 ENCSR807LQP.SP2.HEK293 157 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 151 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 122 bp overlap
SUZ12 9 datasets
ChIP H1 ENCFF881NFR 496 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 163 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 179 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 142 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 260 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 63 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 294 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 352 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 496 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 379 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 496 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 323 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 139 bp overlap
ZBTB7A 2 datasets
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 153 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 227 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 122 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 368 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 225 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 303 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 122 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCFF374TCG 85 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 284 bp overlap
ChIP HepG2 ENCFF840FYM 387 bp overlap