chr10 : 130,105,630 130,106,130
500 bp 94 TFs 3 linked genes
This 500 bp open chromatin element is linked to CTAGE7P, C10orf143, and GLRX3 and is bound by 94 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
CTAGE7P at TSS At TSS Proximity
C10orf143 4.7 kb Proximal Proximity
GLRX3 30.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:130,100,630 – 130,111,130
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AGO2 1 dataset
ChIP HepG2 ENCFF252VFI 500 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 188 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 212 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 500 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 139 bp overlap
ATOH7 2 datasets
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
Motif DE_24h DE_24h-ATOH7_MA1468.1 10 bp overlap
Ar 1 dataset
Motif DE_12h DE_12h-Ar_MA0007.4 16 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 280 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 221 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 301 bp overlap
BRD4 1 dataset
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 368 bp overlap
CBFB 2 datasets
ChIP ME-1 GSE46044.CBFB.ME-1 215 bp overlap
ChIP WTC11 ENCFF113HIY 496 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF128BID 391 bp overlap
ChIP WA01 ENCSR000EBU.CHD1.WA01 302 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 150 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 217 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 384 bp overlap
CTCF 5 datasets
ChIP GM23338 ENCFF531QOI 255 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 230 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 117 bp overlap
ChIP endodermal cell ENCFF471YCZ 283 bp overlap
CTCFL 2 datasets
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Motif DE_24h DE_24h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 128 bp overlap
DMRTA1 2 datasets
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_24h DE_24h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 2 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_24h DE_24h-DMRTA2_MA1478.2 6 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 407 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 124 bp overlap
EGR4 2 datasets
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
Motif DE_24h DE_24h-EGR4_MA0733.2 11 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 339 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 115 bp overlap
ERF::NHLH1 2 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif DE_24h DE_24h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 233 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 242 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 349 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 459 bp overlap
Foxn1 2 datasets
Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap
Motif DE_24h DE_24h-Foxn1_MA1684.1 6 bp overlap
GCM1 2 datasets
Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap
Motif DE_24h DE_24h-GCM1_MA0646.2 10 bp overlap
GCM2 2 datasets
Motif DE_12h DE_12h-GCM2_MA0767.2 8 bp overlap
Motif DE_24h DE_24h-GCM2_MA0767.2 8 bp overlap
GLIS2 2 datasets
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
Motif DE_24h DE_24h-GLIS2_MA0736.1 14 bp overlap
Gli1 2 datasets
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Motif DE_24h DE_24h-Gli1_MA1990.2 10 bp overlap
Gli2 2 datasets
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
Motif DE_24h DE_24h-Gli2_MA0734.4 9 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 366 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 123 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 279 bp overlap
JUND 4 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 328 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 315 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 409 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 292 bp overlap
KLF17 2 datasets
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 170 bp overlap
MTF1 2 datasets
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
Motif DE_24h DE_24h-MTF1_MA0863.1 14 bp overlap
MXI1 3 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 123 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 63 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 196 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 236 bp overlap
NEUROG1 2 datasets
Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap
Motif DE_24h DE_24h-NEUROG1_MA0623.2 10 bp overlap
NFKB1 3 datasets
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
Motif DE_24h DE_24h-NFKB1_MA0105.4 13 bp overlap
Motif ES_0h ES_0h-NFKB1_MA0105.4 13 bp overlap
NFKB2 3 datasets
Motif DE_12h DE_12h-NFKB2_MA0778.2 11 bp overlap
Motif DE_24h DE_24h-NFKB2_MA0778.2 11 bp overlap
Motif ES_0h ES_0h-NFKB2_MA0778.2 11 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 185 bp overlap
NR3C1 1 dataset
Motif DE_12h DE_12h-NR3C1_MA0113.4 15 bp overlap
NR3C2 1 dataset
Motif DE_12h DE_12h-NR3C2_MA0727.2 15 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 375 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 292 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 261 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 311 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 409 bp overlap
PHF8 2 datasets
ChIP WA01 ENCSR000ATK.PHF8.WA01 141 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 158 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 386 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 286 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 359 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 431 bp overlap
PRDM10 2 datasets
ChIP HEK293 ENCFF145WQQ 142 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 205 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 500 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 423 bp overlap
RFX5 3 datasets
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
Motif DE_24h DE_24h-RFX5_MA0510.3 14 bp overlap
Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 243 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 448 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 392 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 325 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 216 bp overlap
SCRT1 2 datasets
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
Motif DE_24h DE_24h-SCRT1_MA0743.3 10 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 259 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 428 bp overlap
SOX13 2 datasets
Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap
Motif DE_24h DE_24h-SOX13_MA1120.2 7 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 276 bp overlap
SOX2 2 datasets
Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap
Motif DE_24h DE_24h-SOX2_MA0143.5 7 bp overlap
SP1 4 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 292 bp overlap
ChIP WTC11 ENCFF688PEU 421 bp overlap
ChIP WTC11 ENCFF688PEU 218 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 214 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 217 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 223 bp overlap
Sox3 2 datasets
Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap
Motif DE_24h DE_24h-Sox3_MA0514.3 7 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 341 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 462 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 312 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 318 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 405 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 302 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 311 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 244 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 155 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 379 bp overlap
VEZF1 2 datasets
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Motif DE_24h DE_24h-VEZF1_MA1578.2 6 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 292 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 229 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZIC4 2 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap
ZIC5 2 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap
ZNF274 2 datasets
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
Motif DE_24h DE_24h-ZNF274_MA1592.2 12 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF320 7 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF512 1 dataset
ChIP WTC11 ENCFF086TTM 310 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap