chr10 : 26,211,748 – 26,212,236
488 bp 87 TFs 1 linked gene
This 488 bp open chromatin element is linked to GAD2 and is bound by 87 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GAD2 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:26,206,748 – 26,217,236
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 193 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 183 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 488 bp overlap
ChIP H1 ENCFF399KAM 314 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 488 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 488 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 488 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 237 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 84 bp overlap
BRD4 4 datasets
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 221 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 338 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 488 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 317 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 346 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 359 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 254 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 488 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 395 bp overlap
CTCF 3 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 275 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 278 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 448 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 371 bp overlap
ERF::NHLH1 1 dataset
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 202 bp overlap
ESR1 6 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 273 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 308 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 301 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 240 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 308 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 291 bp overlap
EZH2 18 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 97 bp overlap
ChIP GM23338 ENCFF886DXX 357 bp overlap
ChIP H1 ENCFF232NZA 488 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 333 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 488 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 488 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 488 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 488 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 488 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 163 bp overlap
ChIP hepatocyte ENCFF552DZB 488 bp overlap
ChIP hepatocyte ENCFF552DZB 488 bp overlap
ChIP hepatocyte ENCFF552DZB 354 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 97 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 322 bp overlap
ChIP neural progenitor cell ENCFF018MKA 488 bp overlap
ChIP neural progenitor cell ENCFF472NFV 488 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 220 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 202 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 228 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 131 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 271 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 359 bp overlap
Hic1 1 dataset
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
JARID2 8 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 488 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 264 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 488 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 488 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 488 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 382 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 329 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 488 bp overlap
JUN 2 datasets
ChIP HUES-8 GSE109524.JUN.HUES-8 286 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 206 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 488 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 488 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WTC11 ENCFF223QFY 459 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 488 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 253 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 314 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 221 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
Nkx2-1 1 dataset
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
Nrf1 1 dataset
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 452 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 414 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 390 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 342 bp overlap
PCBP1 1 dataset
ChIP K-562 ENCSR052PTN.PCBP1.K-562 190 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 385 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 197 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 393 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 369 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 235 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 377 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 300 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 407 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 298 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 488 bp overlap
ChIP H1 ENCFF239FFS 357 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 77 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 64 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 448 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 412 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
RUNX3 1 dataset
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 223 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 396 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SMAD2_3 1 dataset
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 264 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 325 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 342 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 263 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 245 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 369 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 426 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 205 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 120 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 229 bp overlap
SUZ12 10 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 431 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 488 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 488 bp overlap
ChIP H1 ENCFF881NFR 488 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 279 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 377 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 360 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 366 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 393 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 117 bp overlap
TAF15 2 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 253 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 219 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 326 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 173 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 247 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0815.1 13 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 210 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 258 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 448 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 250 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 159 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 408 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 2 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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