chr10 : 11,799,285 11,799,933
648 bp 102 TFs 5 linked genes
This 648 bp open chromatin element is linked to 5 target genes and is bound by 102 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
PROSER2 23.8 kb Distal Multiome
ECHDC3 57.1 kb Distal Multiome
USP6NL 187.9 kb Distal Multiome
UPF2 243.3 kb Distal Multiome
DHTKD1 269.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:11,794,285 – 11,804,933
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 131 bp overlap
BRD2 2 datasets
ChIP K-562 GSE140325.BRD2.K-562 77 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 107 bp overlap
BRD4 2 datasets
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 223 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 125 bp overlap
CDK8 2 datasets
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 58 bp overlap
ChIP SET-2 GSE65138.CDK8.SET-2 77 bp overlap
CTCF 1 dataset
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 111 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 251 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 145 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 62 bp overlap
ELL2 1 dataset
ChIP HeLa GSE40632.ELL2.HeLa 171 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 154 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 219 bp overlap
ESR1 6 datasets
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 310 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 210 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 481 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 501 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 400 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 231 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 258 bp overlap
FEZF2 2 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
FLI1 5 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 53 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 202 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 159 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 145 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 311 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXH1 2 datasets
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
Motif DE_24h DE_24h-FOXH1_MA0479.2 8 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 306 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-2 125 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 271 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 77 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 357 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 55 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 319 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 591 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 92 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 360 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 269 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 209 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 221 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 205 bp overlap
HOXC13 1 dataset
Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap
Hnf1A 2 datasets
Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 2 datasets
ChIP K562 ENCFF348IBL 57 bp overlap
ChIP K562 ENCFF771OHZ 96 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 434 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 284 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 79 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 281 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 262 bp overlap
KDM1A 6 datasets
ChIP H1 ENCFF696SGD 418 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 98 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 173 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 132 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 209 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 263 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 136 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 106 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 240 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 648 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 58 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 648 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 230 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 315 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 180 bp overlap
NFATC3 4 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 229 bp overlap
NFATC4 3 datasets
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
Motif DE_24h DE_24h-NFATC4_MA1525.3 9 bp overlap
Motif DE_36h DE_36h-NFATC4_MA1525.3 9 bp overlap
NRL 2 datasets
Motif DE_24h DE_24h-NRL_MA0842.3 12 bp overlap
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Nfat5 3 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Motif DE_36h DE_36h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 3 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 3 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 293 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF467WJF 190 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 220 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 615 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 640 bp overlap
PROP1 2 datasets
Motif DE_24h DE_24h-PROP1_MA0715.1 11 bp overlap
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
RFX1 7 datasets
Motif DE_24h DE_24h-RFX1_MA0509.3 16 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 283 bp overlap
ChIP K562 ENCFF809XVG 451 bp overlap
ChIP MCF-7 ENCFF782EZS 441 bp overlap
ChIP MCF-7 ENCFF973QAD 405 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 436 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 314 bp overlap
RFX2 1 dataset
Motif DE_24h DE_24h-RFX2_MA0600.3 14 bp overlap
RFX3 1 dataset
Motif DE_24h DE_24h-RFX3_MA0798.3 16 bp overlap
RFX4 2 datasets
Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap
Motif DE_24h DE_24h-RFX4_MA0799.3 13 bp overlap
RFX5 1 dataset
Motif DE_24h DE_24h-RFX5_MA0510.3 14 bp overlap
RNF2 1 dataset
ChIP ME-1_Con GSE128771.RNF2.ME-1_Con 78 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 648 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 648 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 513 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 514 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 648 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 558 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 648 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 204 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 168 bp overlap
SMARCA4 2 datasets
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 222 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 216 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
TEAD1 3 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
Motif DE_24h DE_24h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 247 bp overlap
TEAD2 2 datasets
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
Motif DE_24h DE_24h-TEAD2_MA1121.2 7 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif DE_24h DE_24h-TEAD3_MA0808.1 8 bp overlap
TEAD4 4 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif DE_24h DE_24h-TEAD4_MA0809.3 8 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 121 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 312 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 188 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 55 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 474 bp overlap
ChIP MCF-7 ENCSR231YFE.ZBTB33.MCF-7 266 bp overlap
ZBTB40 1 dataset
ChIP K562 ENCFF337GJB 102 bp overlap
ZFX 2 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 170 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 342 bp overlap
ZNF135 1 dataset
Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 286 bp overlap
ZNF175 1 dataset
ChIP K562 ENCFF497AEJ 129 bp overlap
ZNF213 4 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF460 1 dataset
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
ZNF547 3 datasets
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
Motif DE_24h DE_24h-ZNF547_MA2334.1 13 bp overlap
Motif DE_36h DE_36h-ZNF547_MA2334.1 13 bp overlap
ZNF549 2 datasets
Motif DE_24h DE_24h-ZNF549_MA1728.2 8 bp overlap
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF675 3 datasets
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
Motif DE_24h DE_24h-ZNF675_MA1714.2 19 bp overlap
Motif DE_36h DE_36h-ZNF675_MA1714.2 19 bp overlap
ZNF770 6 datasets
Motif DE_24h DE_24h-ZNF770_MA2099.1 8 bp overlap
ChIP HEK293 ENCFF468FCG 117 bp overlap
ChIP HEK293 ENCFF468FCG 385 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 304 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 239 bp overlap
ChIP HepG2 ENCFF233UVH 338 bp overlap
Zfp809 2 datasets
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif DE_24h DE_24h-Zfx_MA0146.3 10 bp overlap
Znf423 2 datasets
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap
Motif DE_24h DE_24h-Znf423_MA0116.1 15 bp overlap