chr9 : 21,266,586 21,267,376
790 bp 128 TFs 0 linked genes
This 790 bp open chromatin element has no linked target genes and is bound by 128 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:21,261,586 – 21,272,376
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
128 transcription factors
Source
Cell type
AR 3 datasets
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 138 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 117 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 113 bp overlap
Arid3a 1 dataset
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
BCOR 3 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 244 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 323 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 258 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 581 bp overlap
BRD4 2 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 762 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 538 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 597 bp overlap
CTCF 2 datasets
ChIP MDM GSE103477.CTCF.MDM 190 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 273 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 207 bp overlap
DUX4 1 dataset
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Dmrt1 1 dataset
Motif DE_48h DE_48h-Dmrt1_MA1603.2 9 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 321 bp overlap
ChIP GM12878 ENCFF813OXE 265 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 317 bp overlap
ChIP LCL GSE75503.EBF1.LCL 560 bp overlap
ELF1 1 dataset
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
EOMES 3 datasets
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 622 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 201 bp overlap
ETV2::FIGLA 2 datasets
Motif DE_36h DE_36h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_48h DE_48h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FIGLA 2 datasets
Motif DE_36h DE_36h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_48h DE_48h-ETV5FIGLA_MA1945.2 14 bp overlap
EZH2 1 dataset
ChIP WA01 ENCSR000ASY.EZH2.WA01 385 bp overlap
EZH2_phosphoT487 2 datasets
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 157 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 379 bp overlap
FIGLA 2 datasets
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 121 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 688 bp overlap
ChIP DE DE-FOXA2-2 700 bp overlap
FOXG1 1 dataset
Motif DE_48h DE_48h-FOXG1_MA0613.1 8 bp overlap
FOXN3 3 datasets
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
Foxq1 1 dataset
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GATA1 1 dataset
Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 638 bp overlap
ChIP DE DE-GATA4-2 702 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 633 bp overlap
ChIP DE DE-GATA6-2 701 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 629 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 622 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 569 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 768 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 735 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 687 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 585 bp overlap
GFI1 4 datasets
Motif DE_36h DE_36h-GFI1_MA0038.3 11 bp overlap
Motif DE_48h DE_48h-GFI1_MA0038.3 11 bp overlap
Motif DE_48h DE_48h-GFI1_MA0038.3 11 bp overlap
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
Gfi1B 4 datasets
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 226 bp overlap
HNF1A 1 dataset
Motif DE_48h DE_48h-HNF1A_MA0046.3 13 bp overlap
HNF1B 2 datasets
Motif DE_48h DE_48h-HNF1B_MA0153.2 13 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 263 bp overlap
HOXA3 1 dataset
Motif DE_48h DE_48h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif DE_48h DE_48h-HOXA4_MA1496.2 7 bp overlap
HOXB4 1 dataset
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
Hmga1 1 dataset
Motif DE_48h DE_48h-Hmga1_MA2124.1 8 bp overlap
IKZF1 1 dataset
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
IRF3 1 dataset
Motif DE_48h DE_48h-IRF3_MA1418.2 17 bp overlap
IRF4 4 datasets
Motif DE_36h DE_36h-IRF4_MA1419.2 14 bp overlap
Motif DE_48h DE_48h-IRF4_MA1419.2 14 bp overlap
Motif DE_60h DE_60h-IRF4_MA1419.2 14 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 165 bp overlap
IRF8 3 datasets
Motif DE_36h DE_36h-IRF8_MA0652.2 13 bp overlap
Motif DE_48h DE_48h-IRF8_MA0652.2 13 bp overlap
Motif DE_60h DE_60h-IRF8_MA0652.2 13 bp overlap
ISL2 1 dataset
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
JUN 5 datasets
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 255 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 373 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 520 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 138 bp overlap
LIN54 1 dataset
Motif DE_48h DE_48h-LIN54_MA0619.2 7 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 410 bp overlap
MEIS1 1 dataset
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
MGA::EVX1 2 datasets
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
MSC 1 dataset
Motif DE_48h DE_48h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 522 bp overlap
MYF6 1 dataset
Motif DE_48h DE_48h-MYF6_MA0667.1 10 bp overlap
MYOD1 1 dataset
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
Mecom 1 dataset
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 581 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 273 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 509 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 307 bp overlap
ChIP hESC GSE18292.NANOG.hESC 216 bp overlap
NKX6-3 1 dataset
Motif DE_48h DE_48h-NKX6-3_MA1530.2 8 bp overlap
Nr2e1 1 dataset
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
PKNOX2 1 dataset
Motif DE_48h DE_48h-PKNOX2_MA0783.1 12 bp overlap
POU1F1 1 dataset
Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap
POU5F1 5 datasets
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 529 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 621 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 711 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 129 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 707 bp overlap
Prdm14 1 dataset
Motif DE_48h DE_48h-Prdm14_MA1998.2 8 bp overlap
Ptf1A 2 datasets
Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap
Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap
RBPJ 1 dataset
ChIP LCL GSE75503.RBPJ.LCL 206 bp overlap
RELA 2 datasets
Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 183 bp overlap
RELB 1 dataset
Motif DE_48h DE_48h-RELB_MA1117.2 7 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 386 bp overlap
SCRT1 1 dataset
Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap
SFPQ 1 dataset
ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 217 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 210 bp overlap
SMAD2 2 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 480 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 281 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 170 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 425 bp overlap
SNAI2 1 dataset
Motif DE_48h DE_48h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_48h DE_48h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 546 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 535 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 175 bp overlap
SOX8 1 dataset
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
SPI1 1 dataset
ChIP OCI-Ly10 GSE56857.SPI1.OCI-Ly10 179 bp overlap
SRY 3 datasets
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap
STAT1::STAT2 3 datasets
Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_48h DE_48h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
STAT3 3 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 99 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 97 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 101 bp overlap
Sox5 1 dataset
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 360 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 276 bp overlap
TBR1 2 datasets
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
TBX1 2 datasets
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX18 2 datasets
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX19 1 dataset
Motif DE_48h DE_48h-TBX19_MA0804.2 17 bp overlap
TBX2 2 datasets
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
TBX21 4 datasets
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
ChIP GM12878 ENCFF951HUW 485 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 512 bp overlap
TBX3 2 datasets
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
TBXT 1 dataset
Motif DE_48h DE_48h-TBXT_MA0009.2 16 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 187 bp overlap
TFAP4::FLI1 2 datasets
Motif DE_36h DE_36h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif DE_48h DE_48h-TFAP4FLI1_MA1967.2 14 bp overlap
TGIF1 1 dataset
Motif DE_48h DE_48h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_48h DE_48h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_48h DE_48h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_48h DE_48h-TGIF2LY_MA1572.1 12 bp overlap
Tbx6 2 datasets
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Tcf21 1 dataset
Motif DE_48h DE_48h-Tcf21_MA0832.2 10 bp overlap
VENTX 1 dataset
Motif DE_48h DE_48h-VENTX_MA0724.1 9 bp overlap
ZEB1 2 datasets
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZNF140 3 datasets
Motif DE_36h DE_36h-ZNF140_MA1589.2 19 bp overlap
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap
ZNF16 1 dataset
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
ZNF35 3 datasets
Motif DE_36h DE_36h-ZNF35_MA2333.1 7 bp overlap
Motif DE_48h DE_48h-ZNF35_MA2333.1 7 bp overlap
Motif DE_60h DE_60h-ZNF35_MA2333.1 7 bp overlap
ZNF416 1 dataset
Motif DE_48h DE_48h-ZNF416_MA1979.2 10 bp overlap
ZNF558 1 dataset
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
ZNF675 1 dataset
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
ZNF85 2 datasets
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
ZSCAN4 1 dataset
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap