chr9 : 4,739,238 – 4,739,473
235 bp 77 TFs 2 linked genes
This 235 bp open chromatin element is linked to AK3 and ENSG00000287759 and is bound by 77 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
AK3 1.8 kb Proximal Proximity
ENSG00000287759 2.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:4,734,238 – 4,744,473
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 56 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 235 bp overlap
ARID4A 3 datasets
ChIP Hep-G2 ENCSR386UBO.ARID4A.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF142DIE 184 bp overlap
ChIP HepG2 ENCFF142DIE 235 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 169 bp overlap
ATF3 1 dataset
ChIP liver ENCFF375GID 97 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 177 bp overlap
BRD4 1 dataset
ChIP SW480 GSE110473.BRD4.SW480 97 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 153 bp overlap
CEBPB 2 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 82 bp overlap
ChIP A549 ENCFF781RLJ 158 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 202 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 120 bp overlap
ChIP BLaER1 ENCFF093OYK 105 bp overlap
ChIP BLaER1 ENCFF460KDD 216 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 235 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 54 bp overlap
ESR1 3 datasets
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 147 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 171 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 117 bp overlap
ESR1_Y537N 1 dataset
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 190 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 235 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 74 bp overlap
FOXJ3 1 dataset
ChIP HepG2 ENCFF430OSX 235 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 80 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 174 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 154 bp overlap
HMBOX1 4 datasets
ChIP K562 ENCFF055GAZ 129 bp overlap
ChIP K562 ENCFF055GAZ 235 bp overlap
ChIP K562 ENCFF317JJX 122 bp overlap
ChIP K562 ENCFF317JJX 235 bp overlap
HMGXB4 1 dataset
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 170 bp overlap
HNF4A 1 dataset
ChIP liver ERP002306.HNF4A.liver 63 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 197 bp overlap
KMT2A 4 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 235 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 235 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 235 bp overlap
ChIP MV4-11 GSE79899.KMT2A.MV4-11 135 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 213 bp overlap
MCRS1 2 datasets
ChIP Hep-G2 GSE107730.MCRS1.Hep-G2 235 bp overlap
ChIP Hep-G2 GSE97411.MCRS1.Hep-G2 235 bp overlap
MEN1 2 datasets
ChIP MCF-7 GSE85317.MEN1.MCF-7 235 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 235 bp overlap
MLLT1 4 datasets
ChIP GM12878 ENCFF995GXC 227 bp overlap
ChIP GM12878 ENCFF995GXC 154 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 235 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 79 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 111 bp overlap
NCOA2 1 dataset
ChIP HepG2 ENCFF853BJJ 88 bp overlap
NCOR1 1 dataset
ChIP HepG2 ENCFF685NAH 154 bp overlap
NR2F1 3 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 235 bp overlap
ChIP K562 ENCFF221HJH 147 bp overlap
ChIP K562 ENCFF221HJH 235 bp overlap
NR2F6 3 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 121 bp overlap
ChIP HepG2 ENCFF429VKC 235 bp overlap
ChIP K-562 ENCSR707QWA.NR2F6.K-562 95 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 149 bp overlap
PATZ1 2 datasets
ChIP HepG2 ENCFF723PFC 53 bp overlap
ChIP HepG2 ENCFF723PFC 235 bp overlap
PHF8 3 datasets
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 97 bp overlap
ChIP HepG2 ENCFF065NWR 157 bp overlap
ChIP K562 ENCFF217UCA 235 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 235 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 235 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 235 bp overlap
RBFOX2 1 dataset
ChIP K-562 GSE120104.RBFOX2.K-562 173 bp overlap
RELA 2 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 235 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 75 bp overlap
RERE 1 dataset
ChIP HepG2 ENCFF145QRA 57 bp overlap
REST 1 dataset
ChIP liver ENCFF240FWT 235 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 235 bp overlap
SKI 1 dataset
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 148 bp overlap
SKIL 1 dataset
ChIP HepG2 ENCFF823HPQ 90 bp overlap
SMAD7 1 dataset
ChIP HepG2 ENCFF850FXR 235 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 65 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 235 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 82 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 72 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 138 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 219 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 121 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 117 bp overlap
SMARCD3 1 dataset
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 146 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 222 bp overlap
TAF1 2 datasets
ChIP liver ENCFF610UQP 216 bp overlap
ChIP liver ENCSR016BMM.TAF1.liver 144 bp overlap
TCF12 2 datasets
ChIP K562 ENCFF909RDY 76 bp overlap
ChIP K562 ENCFF909RDY 235 bp overlap
THAP7 1 dataset
ChIP HepG2 ENCFF034KPY 52 bp overlap
YY1 5 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 116 bp overlap
ChIP liver ENCFF400MBC 171 bp overlap
ChIP liver ENCFF515BWJ 193 bp overlap
ChIP liver ENCFF515BWJ 235 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 128 bp overlap
ZBTB33 2 datasets
ChIP liver ENCFF592BJA 91 bp overlap
ChIP liver ENCFF592BJA 235 bp overlap
ZBTB40 1 dataset
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 235 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 116 bp overlap
ZFX 4 datasets
ChIP HepG2 ENCFF016NZF 202 bp overlap
ChIP HepG2 ENCFF016NZF 235 bp overlap
ChIP K562 ENCFF536AJO 185 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 112 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 51 bp overlap
ZKSCAN1 1 dataset
ChIP HeLa-S3 ENCFF104OCU 55 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 85 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 235 bp overlap
ZNF274 1 dataset
ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 235 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 186 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 161 bp overlap
ZNF501 2 datasets
ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 235 bp overlap
ChIP HepG2 ENCFF879XZR 235 bp overlap
ZNF558 1 dataset
ChIP HepG2 ENCFF210VCS 235 bp overlap
ZNF598 3 datasets
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 161 bp overlap
ChIP HepG2 ENCFF356UIO 55 bp overlap
ChIP HepG2 ENCFF356UIO 235 bp overlap
ZNF607 1 dataset
ChIP HepG2 ENCFF118ANP 235 bp overlap
ZNF609 1 dataset
ChIP HepG2 ENCFF900FRP 159 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 235 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 235 bp overlap
ZNF770 5 datasets
ChIP HEK293 ENCFF468FCG 235 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 232 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 148 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 235 bp overlap
ChIP HepG2 ENCFF233UVH 235 bp overlap
ZNF786 1 dataset
ChIP Hep-G2 ENCSR206BVQ.ZNF786.Hep-G2 235 bp overlap
ZNF883 1 dataset
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 164 bp overlap
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