chr8 : 142,198,152 142,198,394
242 bp 94 TFs 1 linked gene
This 242 bp open chromatin element is linked to LINC00051 and is bound by 94 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC00051 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:142,193,152 – 142,203,394
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 153 bp overlap
ARNT 1 dataset
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 213 bp overlap
ASCL1 5 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 70 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 160 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 132 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 164 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 134 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 242 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 138 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 117 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 103 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 137 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 66 bp overlap
BRD4 11 datasets
ChIP DND41_E GSE54379.BRD4.DND41_E 242 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 242 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 100 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 242 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 166 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 242 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 238 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 77 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 233 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 242 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 52 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 208 bp overlap
CHD2 1 dataset
ChIP K-562 ENCSR000EHD.CHD2.K-562 122 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 173 bp overlap
CTCF 1 dataset
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 242 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 139 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 242 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 242 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 110 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 177 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 138 bp overlap
ESR1 5 datasets
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 213 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 133 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 89 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 139 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 242 bp overlap
ETS1 2 datasets
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 124 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 142 bp overlap
EZH2 4 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 149 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 65 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 242 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 222 bp overlap
FLI1 2 datasets
ChIP UAE GSE23730.FLI1.UAE 140 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 108 bp overlap
FOXA1 8 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 175 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 128 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 154 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 153 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 104 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 97 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 110 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 77 bp overlap
GTF2F1 2 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 168 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 125 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 189 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 140 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 138 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 127 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR000EGT.IRF1.K-562 184 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 242 bp overlap
ChIP NB4 GSE63484.JMJD1C.NB4 90 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 157 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 188 bp overlap
KMT2A 4 datasets
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 71 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 70 bp overlap
ChIP MOLM-13_DMSO-D3-180110 GSE127507.KMT2A.MOLM-13_DMSO-D3-180110 117 bp overlap
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 242 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 196 bp overlap
MAX 5 datasets
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 145 bp overlap
ChIP NB4 ENCFF966MWB 84 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 191 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 101 bp overlap
ChIP WTC11 ENCFF223QFY 165 bp overlap
MAZ 5 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 177 bp overlap
ChIP K562 ENCFF333ZIV 242 bp overlap
ChIP MCF-7 ENCFF913ACQ 242 bp overlap
ChIP MCF-7 ENCFF913ACQ 93 bp overlap
ChIP MCF-7 ENCSR288IJC.MAZ.MCF-7 242 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 195 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 242 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 155 bp overlap
MYC 4 datasets
ChIP Jurkat GSE83777.MYC.Jurkat 54 bp overlap
ChIP Kelly GSE138295.MYC.Kelly 73 bp overlap
ChIP NB4 ENCSR000EHR.MYC.NB4 91 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 152 bp overlap
MYCN 7 datasets
ChIP BE2C GSE80151.MYCN.BE2C 76 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 199 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 128 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 242 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 154 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 159 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 242 bp overlap
MYOD1 2 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 205 bp overlap
NELFE 3 datasets
ChIP HCT-116_KAP1-KO GSE132705.NELFE.HCT-116_KAP1-KO 116 bp overlap
ChIP HeLa GSE125534.NELFE.HeLa 242 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 78 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 213 bp overlap
NFKB1 3 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 217 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 113 bp overlap
ChIP L1236 GSE63736.NFKB1.L1236 149 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 216 bp overlap
NFYB 9 datasets
ChIP GM12878 ENCFF474DNH 242 bp overlap
ChIP GM12878 ENCSR000DNM.NFYB.GM12878 174 bp overlap
ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 242 bp overlap
ChIP HepG2 ENCFF174VYX 242 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 242 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 242 bp overlap
ChIP K562 ENCFF709RXX 169 bp overlap
ChIP WTC11 ENCFF751ZTQ 242 bp overlap
ChIP WTC11 ENCFF751ZTQ 54 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 202 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 242 bp overlap
NOTCH1 2 datasets
ChIP HCC1599 GSE116871.NOTCH1.HCC1599 134 bp overlap
ChIP HPBALL GSE39263.NOTCH1.HPBALL 193 bp overlap
NRF1 2 datasets
ChIP K-562 ENCSR494TDU.NRF1.K-562 188 bp overlap
ChIP K562 ENCFF791UHF 242 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 176 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 212 bp overlap
POLR2A 5 datasets
ChIP GM12878 ENCFF521FXC 242 bp overlap
ChIP GM23338 ENCFF450WCS 242 bp overlap
ChIP HCT116 ENCFF508RDJ 242 bp overlap
ChIP NB4 ENCFF780KAX 141 bp overlap
ChIP adrenal gland ENCFF843OBJ 242 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 120 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 101 bp overlap
RBPJ 1 dataset
ChIP GIC GSE79734.RBPJ.GIC 205 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 102 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 177 bp overlap
RUNX1 2 datasets
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 242 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 242 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 155 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 73 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 172 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 59 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 242 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 242 bp overlap
SP1 13 datasets
ChIP A-375_DMSO GSE68044.SP1.A-375_DMSO 242 bp overlap
ChIP A-549 ENCSR000BPE.SP1.A-549 184 bp overlap
ChIP GM12878 ENCSR000BHK.SP1.GM12878 128 bp overlap
ChIP H1 ENCFF263FUH 242 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 179 bp overlap
ChIP HEK293T ERP007114.SP1.HEK293T 242 bp overlap
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 213 bp overlap
ChIP K-562 ENCSR991ELG.SP1.K-562 242 bp overlap
ChIP K562 ENCFF088XXV 242 bp overlap
ChIP K562 ENCFF907BMO 242 bp overlap
ChIP K562 ENCFF907BMO 212 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 196 bp overlap
ChIP WTC11 ENCFF688PEU 242 bp overlap
SP2 5 datasets
ChIP HEK293 ENCFF181QXT 242 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 242 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 242 bp overlap
ChIP HEK293T ERP007114.SP2.HEK293T 242 bp overlap
ChIP K562 ENCFF891GNQ 219 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 242 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 242 bp overlap
SP4 3 datasets
ChIP H1 ENCFF473YOB 242 bp overlap
ChIP HEK293 GSE76494.SP4.HEK293 241 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 242 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 213 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 232 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 133 bp overlap
SUPT5H 3 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 242 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 242 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 242 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 242 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 225 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 242 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 97 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 161 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 198 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 198 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 134 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 242 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 181 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 138 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 162 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 242 bp overlap