chr7 : 25,303,448 25,303,677
229 bp 86 TFs 0 linked genes
This 229 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:25,298,448 – 25,308,677
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 229 bp overlap
ARRB1 1 dataset
ChIP LNCaP-C4-2 GSE55615.ARRB1.LNCaP-C4-2 95 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 229 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 113 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 205 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 229 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 99 bp overlap
BRD4 4 datasets
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 185 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 185 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 207 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 165 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 229 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 175 bp overlap
CHD7 3 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 152 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 190 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 229 bp overlap
CREB5 2 datasets
ChIP SK-N-SH ENCFF144PMI 229 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
CREBBP 1 dataset
ChIP fibroblast_senescent GSE106146.CREBBP.fibroblast_senescent 171 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 229 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 229 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 222 bp overlap
CTCF 3 datasets
ChIP GM23338 ENCFF772DML 107 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 132 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 168 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 212 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 173 bp overlap
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 219 bp overlap
ESRRG 3 datasets
ChIP SK-N-SH ENCFF394HLU 213 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 115 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 229 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 160 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 137 bp overlap
ETV1 3 datasets
ChIP GIST GSE22441.ETV1.GIST 137 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 229 bp overlap
ChIP GIST48_siSCR GSE106624.ETV1.GIST48_siSCR 229 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 229 bp overlap
EZH2 1 dataset
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 162 bp overlap
FOSL2 2 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 151 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 229 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 80 bp overlap
FOXF1 2 datasets
ChIP GIST48 GSE106624.FOXF1.GIST48 96 bp overlap
ChIP GIST48_siETV1 GSE106624.FOXF1.GIST48_siETV1 229 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 149 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 92 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 157 bp overlap
GATA2 3 datasets
ChIP ESF GSE108408.GATA2.ESF 229 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 192 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 180 bp overlap
GLIS3 2 datasets
ChIP SK-N-SH ENCFF370MHZ 202 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 152 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 173 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 223 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 224 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 223 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 229 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 229 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 229 bp overlap
KDM4A 2 datasets
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 117 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 138 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 82 bp overlap
MED1 1 dataset
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 229 bp overlap
MYC 1 dataset
ChIP PAVE GSE47152.MYC.PAVE 169 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 181 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 211 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 149 bp overlap
MYOG 2 datasets
ChIP RH4 GSE83726.MYOG.RH4 117 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 189 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 229 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 174 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 229 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 229 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 229 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 229 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 229 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 74 bp overlap
ChIP IMR-90_alpha-amanitin-1H GSE118494.NCAPH2.IMR-90_alpha-amanitin-1H 229 bp overlap
NIPBL 3 datasets
ChIP hESC GSE64758.NIPBL.hESC 194 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 188 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 159 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 156 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 229 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 199 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 229 bp overlap
POLR2A 6 datasets
ChIP breast epithelium ENCFF960NNA 229 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 229 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 229 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 229 bp overlap
ChIP stomach ENCFF820WZN 186 bp overlap
ChIP suprapubic skin ENCFF748PRQ 222 bp overlap
POU5F1 9 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 229 bp overlap
ChIP GM23338 ENCFF333SNB 229 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 229 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 210 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 196 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 207 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 229 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 229 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 229 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 229 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 229 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 229 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 229 bp overlap
ChIP H1 ENCFF896IJG 219 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 229 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 151 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 216 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 122 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 229 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 181 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 94 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 200 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 229 bp overlap
SMARCA4 8 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 61 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 229 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 229 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 229 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 229 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 136 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 229 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 229 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 207 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 104 bp overlap
SMARCC1 6 datasets
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 229 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 197 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 171 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 199 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 176 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 208 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH ENCFF449PID 212 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 229 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 202 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 210 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 229 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 229 bp overlap
SS18 3 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 229 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 229 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 65 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 126 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 126 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 198 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 229 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 144 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 201 bp overlap
TCF12 3 datasets
ChIP H1 ENCFF203EBH 146 bp overlap
ChIP SK-N-SH ENCFF147AHB 107 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 229 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 205 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 229 bp overlap
TEAD1 3 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 131 bp overlap
ChIP WTC11 ENCFF502QUV 229 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 212 bp overlap
TEAD4 8 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 229 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 229 bp overlap
ChIP H1 ENCFF778PAX 200 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 147 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 229 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 229 bp overlap
ChIP WTC11 ENCFF114TZS 229 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 229 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 229 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 133 bp overlap
YAP1 2 datasets
ChIP WA01 GSE99202.YAP1.WA01 229 bp overlap
ChIP hiPSC GSE111930.YAP1.hiPSC 190 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 226 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 134 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 158 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 229 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 229 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
ZNF143 7 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 120 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 155 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 145 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 178 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 145 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 136 bp overlap
ChIP WTC11 ENCFF249JUK 229 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 99 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 229 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 229 bp overlap