chr7 : 21,642,273 21,643,074
801 bp 97 TFs 2 linked genes
This 801 bp open chromatin element is linked to DNAH11 and SP4 and is bound by 97 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
DNAH11 99.6 kb Distal Multiome
SP4 214.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:21,637,273 – 21,648,074
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
97 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 473 bp overlap
ChIP 12Z GSE129781.ARID1A.12Z 191 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 273 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 183 bp overlap
BRD4 1 dataset
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 231 bp overlap
CDX4 2 datasets
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap
CEBPB 1 dataset
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 110 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 586 bp overlap
CTCF 4 datasets
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap
Motif DE_48h DE_48h-CTCF_MA1930.2 33 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 175 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 463 bp overlap
EP300 3 datasets
ChIP Ishikawa ENCFF364ZWT 417 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 363 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 159 bp overlap
ESR1 9 datasets
Motif DE_36h DE_36h-ESR1_MA0112.4 15 bp overlap
Motif DE_60h DE_60h-ESR1_MA0112.4 15 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 253 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 263 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 234 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 384 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 206 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 186 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 287 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 152 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 358 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 141 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 318 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 168 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 594 bp overlap
ChIP DE DE-FOXA2-2 666 bp overlap
Foxn1 2 datasets
Motif DE_36h DE_36h-Foxn1_MA1684.1 6 bp overlap
Motif DE_60h DE_60h-Foxn1_MA1684.1 6 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 721 bp overlap
ChIP DE DE-GATA4-2 768 bp overlap
ChIP foregut GSE117136.GATA4.foregut 661 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 639 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 553 bp overlap
GATA5 2 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 16 datasets
ChIP DE DE-GATA6-1 712 bp overlap
ChIP DE DE-GATA6-2 729 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 698 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 705 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 651 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 801 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 758 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 744 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 698 bp overlap
ChIP foregut GSE117136.GATA6.foregut 648 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 517 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 530 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 588 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 468 bp overlap
GLI3 1 dataset
Motif DE_60h DE_60h-GLI3_MA1491.3 15 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 216 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 315 bp overlap
GTF2B 1 dataset
ChIP IMR-90_TERT GSE38303.GTF2B.IMR-90_TERT 277 bp overlap
Gata3 2 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Gli1 1 dataset
Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap
HOXB13 2 datasets
Motif DE_36h DE_36h-HOXB13_MA0901.3 9 bp overlap
Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 2 datasets
Motif DE_36h DE_36h-Hoxa13_MA0650.4 8 bp overlap
Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 367 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 425 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 380 bp overlap
JUNB 2 datasets
Motif DE_36h DE_36h-JUNB_MA0490.3 9 bp overlap
Motif DE_60h DE_60h-JUNB_MA0490.3 9 bp overlap
JUND 3 datasets
Motif DE_36h DE_36h-JUND_MA0491.3 9 bp overlap
Motif DE_60h DE_60h-JUND_MA0491.3 9 bp overlap
ChIP K562 ENCFF336RCR 461 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 180 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MED1 2 datasets
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 180 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 372 bp overlap
MEIS1 3 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
ChIP HEK293 ENCFF821TIY 385 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 248 bp overlap
ChIP K562 ENCFF320GSD 381 bp overlap
MYB 2 datasets
Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 417 bp overlap
NFATC3 2 datasets
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NFE2 5 datasets
Motif DE_36h DE_36h-NFE2_MA0841.2 10 bp overlap
Motif DE_60h DE_60h-NFE2_MA0841.2 10 bp overlap
ChIP K-562 ENCSR552YGL.NFE2.K-562 221 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 182 bp overlap
ChIP K562 ENCFF047YKA 405 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 127 bp overlap
Nfat5 2 datasets
Motif DE_36h DE_36h-Nfat5_MA0606.3 8 bp overlap
Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 384 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 309 bp overlap
ChIP K562 ENCFF286KMN 417 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 452 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 239 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 391 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 473 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 385 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 529 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 85 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 157 bp overlap
RARA 3 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 260 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 602 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 769 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 138 bp overlap
RFX1 2 datasets
Motif DE_36h DE_36h-RFX1_MA0509.3 16 bp overlap
Motif DE_48h DE_48h-RFX1_MA0509.3 16 bp overlap
RFX2 2 datasets
Motif DE_36h DE_36h-RFX2_MA0600.3 14 bp overlap
Motif DE_48h DE_48h-RFX2_MA0600.3 14 bp overlap
RFX5 2 datasets
Motif DE_36h DE_36h-RFX5_MA0510.3 14 bp overlap
Motif DE_48h DE_48h-RFX5_MA0510.3 14 bp overlap
RORA 2 datasets
Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap
Motif DE_48h DE_48h-RORA_MA0072.2 11 bp overlap
Rfx6 2 datasets
Motif DE_36h DE_36h-Rfx6_MA1724.2 9 bp overlap
Motif DE_48h DE_48h-Rfx6_MA1724.2 9 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 198 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 146 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 662 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 659 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 551 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 566 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 626 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 383 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 761 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 801 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 424 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 408 bp overlap
SMARCA4 6 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 557 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 304 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 769 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 801 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 709 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 524 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 443 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 536 bp overlap
SOX18 2 datasets
Motif DE_36h DE_36h-SOX18_MA1563.2 8 bp overlap
Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap
SOX2 9 datasets
ChIP HNSC GSE69479.SOX2.HNSC 764 bp overlap
ChIP NPC GSE122631.SOX2.NPC 218 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 451 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 117 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 321 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 374 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 429 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 393 bp overlap
SOX21 2 datasets
Motif DE_36h DE_36h-SOX21_MA0866.1 15 bp overlap
Motif DE_60h DE_60h-SOX21_MA0866.1 15 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 251 bp overlap
SOX8 2 datasets
Motif DE_36h DE_36h-SOX8_MA0868.3 7 bp overlap
Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap
SOX9 2 datasets
Motif DE_36h DE_36h-SOX9_MA0077.2 8 bp overlap
Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 162 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 190 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SRF 6 datasets
ChIP H1 ENCFF036PEF 225 bp overlap
ChIP Ishikawa ENCFF992QXM 305 bp overlap
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 318 bp overlap
ChIP K-562 ENCSR582IAO.SRF.K-562 145 bp overlap
ChIP K562 ENCFF766EOO 397 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 216 bp overlap
Sox1 2 datasets
Motif DE_36h DE_36h-Sox1_MA0870.1 15 bp overlap
Motif DE_60h DE_60h-Sox1_MA0870.1 15 bp overlap
Sox5 2 datasets
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TAL1 2 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 114 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 338 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 471 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 259 bp overlap
TEAD1 2 datasets
Motif DE_48h DE_48h-TEAD1_MA0090.4 9 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 274 bp overlap
TEAD2 1 dataset
Motif DE_48h DE_48h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_48h DE_48h-TEAD3_MA0808.1 8 bp overlap
TEAD4 4 datasets
Motif DE_48h DE_48h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP Ishikawa ENCFF772OTG 301 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 272 bp overlap
TRPS1 2 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 437 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 465 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 318 bp overlap
ZIC4 1 dataset
Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 162 bp overlap
ZNF157 2 datasets
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap
ZNF16 2 datasets
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 235 bp overlap