chr6:34,202,245–34,203,164

chr6 : 34,202,245 – 34,203,164

919 bp 90 TFs 7 linked genes

This 919 bp open chromatin element is linked to 7 target genes and is bound by 90 transcription factors.

Linked Genes

7 genes

Gene	Expression	Dist. to TSS	Distance	Link type
HMGA1		34.1 kb	Distal	Multiome
ENSG00000225339		45.8 kb	Distal	Multiome
SMIM29		46.2 kb	Distal	Multiome
GRM4		146.5 kb	Distal	Multiome
NUDT3		189.9 kb	Distal	Multiome
RPS10		223.3 kb	Distal	Multiome
PACSIN1		263.3 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

90 transcription factors

AFF4 3 datasets

ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 149 bp overlap

ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 164 bp overlap

ChIP MCF-7 GSE144036.AFF4.MCF-7 313 bp overlap

AGO1 2 datasets

ChIP Hep-G2 GSE120104.AGO1.Hep-G2 277 bp overlap

ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 281 bp overlap

ARID4A 1 dataset

ChIP HepG2 ENCFF142DIE 153 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 121 bp overlap

BRD4 4 datasets

ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 266 bp overlap

ChIP hESC GSE33281.BRD4.hESC 163 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 270 bp overlap

ChIP K562 ENCFF008KGK 410 bp overlap

CTBP1 1 dataset

ChIP K-562 ENCSR201NQZ.CTBP1.K-562 223 bp overlap

ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 405 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 350 bp overlap

DRAP1 2 datasets

ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 143 bp overlap

ChIP HepG2 ENCFF296JHR 117 bp overlap

ChIP WTC11 ENCFF449LLF 491 bp overlap

ChIP HEK293 ENCFF336LFH 107 bp overlap

ELF1 2 datasets

ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 233 bp overlap

ChIP K562 ENCFF496AKI 277 bp overlap

ChIP MCF-7 GSE23730.ERG.MCF-7 96 bp overlap

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 349 bp overlap

ChIP WTC11 ENCFF812SCD 394 bp overlap

FIP1L1 3 datasets

ChIP K-562 ENCSR177DNR.FIP1L1.K-562 193 bp overlap

ChIP K-562 GSE120104.FIP1L1.K-562 193 bp overlap

ChIP K562 ENCFF002WKI 378 bp overlap

ChIP SKNO-1 GSE23730.FLI1.SKNO-1 261 bp overlap

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 434 bp overlap

GABPA 1 dataset

ChIP HepG2 ENCFF180FFY 446 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 523 bp overlap

GTF2F1 3 datasets

ChIP K562 ENCFF501ZHS 322 bp overlap

ChIP K562 ENCFF940JZP 332 bp overlap

ChIP K562 ENCFF940JZP 126 bp overlap

HDAC2 1 dataset

ChIP H1 ENCFF353UJQ 645 bp overlap

HDGF 2 datasets

ChIP K-562 ENCSR563YDA.HDGF.K-562 109 bp overlap

ChIP K-562 ENCSR197ALX.HDGF.K-562 283 bp overlap

HEXIM1 1 dataset

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 214 bp overlap

HIVEP1 1 dataset

ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 283 bp overlap

HMGN3 1 dataset

ChIP K562 ENCFF083BIJ 321 bp overlap

HNRNPLL 3 datasets

ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 386 bp overlap

ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 350 bp overlap

ChIP HepG2 ENCFF355PIC 601 bp overlap

INTS11 2 datasets

ChIP HL-60_PMA GSE106359.INTS11.HL-60_PMA 228 bp overlap

ChIP HeLa GSE125534.INTS11.HeLa 210 bp overlap

INTS13 2 datasets

ChIP HL-60_PMA GSE106359.INTS13.HL-60_PMA 195 bp overlap

ChIP HL-60_shEGR1 GSE106359.INTS13.HL-60_shEGR1 227 bp overlap

JUND 2 datasets

ChIP H1 ENCFF468JZD 231 bp overlap

ChIP WA01 ENCSR000BKP.JUND.WA01 102 bp overlap

KDM5B 2 datasets

ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 249 bp overlap

ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 164 bp overlap

NELFA 2 datasets

ChIP HeLa_1h_Flavo-35min-H2O2 GSE93931.NELFA.HeLa_1h_Flavo-35min-H2O2 321 bp overlap

ChIP HeLa_Flavo-35min-H2O2 GSE100742.NELFA.HeLa_Flavo-35min-H2O2 321 bp overlap

NELFE 3 datasets

ChIP HCT-116_KAP1-KO GSE132705.NELFE.HCT-116_KAP1-KO 310 bp overlap

ChIP HeLa GSE125534.NELFE.HeLa 192 bp overlap

ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 187 bp overlap

NFATC3 1 dataset

ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 322 bp overlap

ChIP Hep-G2 ENCSR935GZV.NFYB.Hep-G2 143 bp overlap

ChIP HepG2 ENCFF836FYP 411 bp overlap

OGG1 4 datasets

ChIP HEK293 GSE89017.OGG1.HEK293 428 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 310 bp overlap

ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 142 bp overlap

ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 238 bp overlap

PCBP1 1 dataset

ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 277 bp overlap

ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 53 bp overlap

POLR2A 7 datasets

ChIP GM23338 ENCFF450WCS 426 bp overlap

ChIP H1 ENCFF566JSR 215 bp overlap

ChIP H1 ENCFF833NJP 354 bp overlap

ChIP HCT116 ENCFF508RDJ 317 bp overlap

ChIP HCT116 ENCFF849NGT 343 bp overlap

ChIP HeLa-S3 ENCFF224LWS 500 bp overlap

ChIP HeLa-S3 ENCFF773DNG 409 bp overlap

POLR2G 1 dataset

ChIP K562 ENCFF648YPL 385 bp overlap

POU5F1 3 datasets

ChIP BG03 GSE21614.POU5F1.BG03 200 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 266 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 324 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 862 bp overlap

PRDM15 3 datasets

ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 374 bp overlap

ChIP HepG2 ENCFF259LUZ 373 bp overlap

ChIP WTC11 ENCFF108TMF 260 bp overlap

RAD21 1 dataset

ChIP HCT-116 GSE131606.RAD21.HCT-116 382 bp overlap

RBFOX2 2 datasets

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 180 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 180 bp overlap

RBM39 2 datasets

ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 250 bp overlap

ChIP Hep-G2 GSE120104.RBM39.Hep-G2 269 bp overlap

ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 273 bp overlap

ChIP HCC70 GSE126380.RORC.HCC70 196 bp overlap

RREB1 1 dataset

Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap

RUNX1 2 datasets

ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 223 bp overlap

ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 156 bp overlap

SETDB1 1 dataset

ChIP K-562 ENCSR000EWI.SETDB1.K-562 115 bp overlap

SIRT6 1 dataset

ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 234 bp overlap

SMARCA4 1 dataset

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 294 bp overlap

SMARCC1 1 dataset

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 297 bp overlap

ChIP H1 ENCFF263FUH 297 bp overlap

ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 124 bp overlap

ChIP HEK293 ENCFF181QXT 193 bp overlap

ChIP HEK293 ENCSR807LQP.SP2.HEK293 296 bp overlap

ChIP HEK293 GSE76494.SP2.HEK293 236 bp overlap

ChIP HEK293 GSE76494.SP4.HEK293 211 bp overlap

ChIP WA01 ENCSR000BQV.SP4.WA01 157 bp overlap

SPI1 6 datasets

ChIP HL-60 ENCFF645GBT 271 bp overlap

ChIP K-562 ENCSR000BGW.SPI1.K-562 126 bp overlap

ChIP K562 ENCFF410ORC 205 bp overlap

ChIP U-937 GSE128834.SPI1.U-937 172 bp overlap

ChIP monocyte GSE31621.SPI1.monocyte 132 bp overlap

ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 223 bp overlap

SREBP2 1 dataset

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 202 bp overlap

SRSF1 1 dataset

ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 213 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 155 bp overlap

SUPT5H 3 datasets

ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 298 bp overlap

ChIP HeLa GSE125534.SUPT5H.HeLa 270 bp overlap

ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 232 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 413 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 137 bp overlap

TBP 11 datasets

ChIP H1 ENCFF859IIO 225 bp overlap

ChIP HepG2 ENCFF023IVD 361 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 222 bp overlap

ChIP hESC GSE122298.TBP.hESC 354 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 232 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 122 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 165 bp overlap

ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 605 bp overlap

ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 224 bp overlap

ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 352 bp overlap

ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 330 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 243 bp overlap

THAP9 1 dataset

ChIP HepG2 ENCFF687WSR 721 bp overlap

TRIM24 3 datasets

ChIP K-562 ENCSR907MZR.TRIM24.K-562 221 bp overlap

ChIP K562 ENCFF616RIL 382 bp overlap

ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 116 bp overlap

TRIM28 5 datasets

ChIP K-562 ENCSR474CVP.TRIM28.K-562 288 bp overlap

ChIP K-562 ENCSR000EVY.TRIM28.K-562 229 bp overlap

ChIP K562 ENCFF429WPG 392 bp overlap

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 352 bp overlap

ChIP hESC GSE115387.TRIM28.hESC 183 bp overlap

ChIP H1 ENCFF090WVU 241 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 134 bp overlap

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 260 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 117 bp overlap

ZNF274 1 dataset

ChIP Hep-G2 ENCSR871VNN.ZNF274.Hep-G2 451 bp overlap

ZNF280A 2 datasets

ChIP K-562 ENCSR370NFS.ZNF280A.K-562 223 bp overlap

ChIP K562 ENCFF706EWX 313 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCFF784SLD 621 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 120 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 315 bp overlap

ZNF416 1 dataset

Motif DE_24h DE_24h-ZNF416_MA1979.2 10 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 148 bp overlap

ZNF501 1 dataset

ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 565 bp overlap

ZNF572 1 dataset

ChIP Hep-G2 ENCSR663CTC.ZNF572.Hep-G2 369 bp overlap

ZNF574 1 dataset

Motif DE_24h DE_24h-ZNF574_MA1982.2 14 bp overlap

ZNF598 1 dataset

ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 357 bp overlap

ZNF680 1 dataset

ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 106 bp overlap

ZNF740 1 dataset

Motif ES_0h ES_0h-ZNF740_MA0753.3 10 bp overlap

ZNF768 1 dataset

Motif DE_24h DE_24h-ZNF768_MA1731.2 9 bp overlap

ZNF883 1 dataset

ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 288 bp overlap

ZNF891 1 dataset

ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 424 bp overlap