chr6 : 24,918,781 24,919,332
551 bp 99 TFs 1 linked gene
This 551 bp open chromatin element is linked to RIPOR2 and is bound by 99 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RIPOR2 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:24,913,781 – 24,924,332
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 205 bp overlap
ARID1A 2 datasets
ChIP NGP GSE134626.ARID1A.NGP 216 bp overlap
ChIP NGP GSE134626.ARID1A.NGP 122 bp overlap
ASH2L 2 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 196 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 551 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 511 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 368 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 551 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 392 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 160 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 241 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 295 bp overlap
BRD4 19 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 190 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 516 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 285 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 186 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 491 bp overlap
ChIP Mutu-1_JQ1 GSE84213.BRD4.Mutu-1_JQ1 411 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 551 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 70 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 551 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 342 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 259 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 285 bp overlap
ChIP SEM GSE83671.BRD4.SEM 217 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 272 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 161 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 215 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 189 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 551 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 454 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 551 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 551 bp overlap
CEBPB 2 datasets
ChIP MV4-11 GSE88746.CEBPB.MV4-11 241 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 176 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 115 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 243 bp overlap
ChIP macrophage GSE136216.CHD4.macrophage 202 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 271 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 505 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 551 bp overlap
CTCF 1 dataset
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 253 bp overlap
Cebpa 11 datasets
ChIP BLaER1 ENCFF031ISE 358 bp overlap
ChIP BLaER1 ENCFF093OYK 446 bp overlap
ChIP BLaER1 ENCFF250ODG 441 bp overlap
ChIP BLaER1 ENCFF274GAT 393 bp overlap
ChIP BLaER1 ENCFF335XTP 318 bp overlap
ChIP BLaER1 ENCFF341QPD 414 bp overlap
ChIP BLaER1 ENCFF364PUR 512 bp overlap
ChIP BLaER1 ENCFF508JZF 403 bp overlap
ChIP BLaER1 ENCFF844FIP 361 bp overlap
ChIP BLaER1 ENCFF858JKM 199 bp overlap
ChIP BLaER1 ENCFF896HSY 251 bp overlap
EBF1 3 datasets
ChIP LCL GSE75503.EBF1.LCL 228 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 379 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 316 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 485 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 236 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 551 bp overlap
ChIP neural cell ENCFF442QNK 437 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 234 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 243 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 334 bp overlap
FOXA1 3 datasets
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 166 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 146 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 297 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 264 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 234 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 112 bp overlap
FOXP1 2 datasets
ChIP B-cell_CD77-pos GSE114803.FOXP1.B-cell_CD77-pos 168 bp overlap
ChIP B-cell_IgD-pos GSE114803.FOXP1.B-cell_IgD-pos 133 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 277 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 243 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 198 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 249 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 551 bp overlap
HDAC2 3 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 305 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 145 bp overlap
ChIP pre-B-cell GSE107886.HDAC2.pre-B-cell 372 bp overlap
IKZF1 2 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 441 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 551 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 551 bp overlap
IRF1 2 datasets
ChIP K-562 ENCSR854MCV.IRF1.K-562 368 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 365 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 241 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 253 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 73 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 373 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 291 bp overlap
KMT2A 4 datasets
ChIP L826 GSE83671.KMT2A.L826 174 bp overlap
ChIP MOLM-13_DMSO-D3-180110 GSE127507.KMT2A.MOLM-13_DMSO-D3-180110 269 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 288 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 198 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 190 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 181 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 470 bp overlap
MECOM 1 dataset
ChIP SKH1 GSE102697.MECOM.SKH1 219 bp overlap
MED1 2 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 182 bp overlap
ChIP RH4 GSE83726.MED1.RH4 440 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 480 bp overlap
MEIS1 1 dataset
ChIP SEM GSE38339.MEIS1.SEM 158 bp overlap
MTA2 2 datasets
ChIP RH4 GSE155861.MTA2.RH4 222 bp overlap
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 287 bp overlap
MXI1 3 datasets
ChIP neural ENCSR934NHU.MXI1.neural 253 bp overlap
ChIP neural cell ENCFF623HQN 480 bp overlap
ChIP neural cell ENCFF623HQN 413 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 235 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 312 bp overlap
MYOD1 4 datasets
ChIP RD GSE137168.MYOD1.RD 531 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 551 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 201 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 499 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 441 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 214 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 191 bp overlap
NR3C1 1 dataset
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 337 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 280 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 140 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 309 bp overlap
PDX1 2 datasets
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 144 bp overlap
ChIP islet ERP001456.PDX1.islet 153 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 227 bp overlap
POLR2A 2 datasets
ChIP neural cell ENCFF604SPB 235 bp overlap
ChIP spleen ENCFF044PYR 267 bp overlap
POU2AF1 1 dataset
ChIP pre-B-cell GSE107886.POU2AF1.pre-B-cell 349 bp overlap
POU2F2 2 datasets
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 189 bp overlap
ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 217 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 266 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 289 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 386 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 341 bp overlap
PRDM1 4 datasets
ChIP HEK293 ENCFF302TBP 421 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 176 bp overlap
ChIP plasmablast GSE142493.PRDM1.plasmablast 259 bp overlap
ChIP plasmablast_G9A-i GSE142493.PRDM1.plasmablast_G9A-i 202 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 306 bp overlap
RAD21 2 datasets
ChIP RH4 GSE83726.RAD21.RH4 211 bp overlap
ChIP neural cell ENCFF564MOT 300 bp overlap
RBBP4 3 datasets
ChIP RH5 GSE155861.RBBP4.RH5 186 bp overlap
ChIP RH5 GSE155861.RBBP4.RH5 113 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 247 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 210 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 176 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 551 bp overlap
RUNX1 3 datasets
ChIP 697 GSE138031.RUNX1.697 201 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 386 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 331 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 295 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 191 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 312 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 290 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 427 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 459 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 464 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 389 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 378 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 445 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 433 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 390 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 412 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 234 bp overlap
SMARCA4 4 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 476 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 393 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 334 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 204 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 275 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 170 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 127 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 231 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 364 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 250 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 431 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 141 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 142 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 105 bp overlap
SRF 3 datasets
ChIP GM12878 ENCFF878IIX 397 bp overlap
ChIP GM12878 ENCSR041XML.SRF.GM12878 290 bp overlap
ChIP GM12878 ENCSR000BMI.SRF.GM12878 151 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 248 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 272 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 264 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 161 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 358 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 318 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 371 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 218 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 265 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 506 bp overlap
ZNF786 1 dataset
ChIP HEK293T GSE78099.ZNF786.HEK293T 163 bp overlap