chr5 : 158,590,809 158,591,276
467 bp 99 TFs 0 linked genes
This 467 bp open chromatin element has no linked target genes and is bound by 99 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:158,585,809 – 158,596,276
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
AR 4 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 205 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 321 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 77 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 130 bp overlap
BARX2 1 dataset
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 75 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 110 bp overlap
BRD4 4 datasets
ChIP BE2C GSE80151.BRD4.BE2C 83 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 234 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 245 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 83 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 102 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 158 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 258 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 55 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 178 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 97 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 129 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 239 bp overlap
EZH2 1 dataset
ChIP hepatocyte ENCFF118DKH 105 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 70 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 91 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 385 bp overlap
ChIP DE DE-FOXA2-2 410 bp overlap
FOXD2 2 datasets
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 73 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GATA2 2 datasets
ChIP SK-N-SH ENCFF764OZD 53 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 53 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 50 bp overlap
ChIP SK-N-SH ENCFF040SSB 116 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 278 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-2 275 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 138 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 135 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 344 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 82 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 217 bp overlap
HOXB13 10 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 122 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 138 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 89 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 80 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 92 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 71 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 82 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 109 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 135 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 131 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 223 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 297 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 355 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 301 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 146 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 467 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 214 bp overlap
KLF9 1 dataset
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 250 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 71 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 113 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 70 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 106 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 311 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 297 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 308 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 256 bp overlap
ChIP hESC GSE18292.NANOG.hESC 147 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 115 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 141 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 393 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 104 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 150 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 429 bp overlap
POLR2A 2 datasets
ChIP PFSK-1 ENCFF576NIT 100 bp overlap
ChIP SK-N-SH ENCFF683PFH 129 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 186 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 125 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 201 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 173 bp overlap
RBBP5 1 dataset
ChIP H1 ENCFF905HFL 55 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 156 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 428 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 242 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 359 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 467 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 467 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 327 bp overlap
SMARCA2 4 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 246 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 342 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 226 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 146 bp overlap
SMARCA4 3 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 334 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 328 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 213 bp overlap
SOX15 1 dataset
Motif DE_12h DE_12h-SOX15_MA1152.2 7 bp overlap
SOX18 1 dataset
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 215 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 145 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 125 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 117 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 266 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 195 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 237 bp overlap
TAF1 2 datasets
ChIP PFSK-1 ENCFF982LZL 431 bp overlap
ChIP PFSK-1 ENCFF982LZL 242 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 62 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 190 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 77 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 114 bp overlap
TEAD4 3 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 170 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 170 bp overlap
ChIP SK-N-SH ENCFF754TJT 79 bp overlap
TOX2 2 datasets
ChIP SK-N-SH ENCFF415OYE 103 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 55 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 60 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 145 bp overlap
TWIST1 4 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 151 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 59 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 59 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 151 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 73 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 77 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 322 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCFF481TFV 125 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap