chr5 : 51,185,783 51,186,320
537 bp 103 TFs 0 linked genes
This 537 bp open chromatin element has no linked target genes and is bound by 103 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:51,180,783 – 51,191,320
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 537 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 244 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 347 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BRD4 14 datasets
ChIP BE2C GSE80151.BRD4.BE2C 336 bp overlap
ChIP CLB-Ga GSE133453.BRD4.CLB-Ga 487 bp overlap
ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 426 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 140 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 286 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 91 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 215 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 396 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 499 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 336 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 158 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 141 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 259 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 369 bp overlap
CDK2 1 dataset
ChIP T-47D_PROGESTIN_5M GSE53855.CDK2.T-47D_PROGESTIN_5M 181 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 243 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 123 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 455 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 322 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 149 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 111 bp overlap
CTCF 13 datasets
ChIP BE2C ENCFF757SRF 286 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 142 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 221 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 213 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 162 bp overlap
ChIP SK-N-SH ENCFF731NJX 251 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 200 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 96 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 143 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 192 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 178 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 212 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 278 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 251 bp overlap
DPF2 2 datasets
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 509 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 503 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 232 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF829RWA 226 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 537 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 254 bp overlap
ChIP neural cell ENCFF442QNK 391 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 289 bp overlap
GABPA 1 dataset
ChIP MCF-7 GSE72082.GABPA.MCF-7 62 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 306 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 253 bp overlap
ChIP SK-N-SH ENCFF764OZD 308 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 282 bp overlap
GATA3 9 datasets
ChIP BE2C GSE65664.GATA3.BE2C 191 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 537 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 173 bp overlap
ChIP SH-SY5Y ENCFF475HYF 256 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 192 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 136 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 216 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 188 bp overlap
ChIP SK-N-SH ENCFF040SSB 275 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 347 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 392 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 412 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 345 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 496 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 537 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 537 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 405 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 537 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 242 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 356 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 95 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 85 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 537 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 467 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 498 bp overlap
KMT2C 1 dataset
ChIP BIN-67_ctrl GSE117734.KMT2C.BIN-67_ctrl 249 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4-T910M 216 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 175 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 118 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 452 bp overlap
MXI1 3 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
ChIP SK-N-SH ENCFF746HVJ 231 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 391 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 536 bp overlap
MYCN 11 datasets
ChIP BE2C GSE80151.MYCN.BE2C 315 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 234 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 537 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 262 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 173 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 442 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 308 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 175 bp overlap
ChIP NGP GSE80151.MYCN.NGP 203 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 315 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 303 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 353 bp overlap
MYOG 3 datasets
ChIP RH4 GSE83726.MYOG.RH4 207 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 209 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 231 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 133 bp overlap
NEUROD1 2 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 74 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 202 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_GRKD_TA_TNFA GSE24518.NR3C1.HeLa-B2_GRKD_TA_TNFA 157 bp overlap
Nr2e3 1 dataset
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 203 bp overlap
PAX3-FOXO1 2 datasets
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 407 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 283 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 185 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 537 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 537 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 537 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 377 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 440 bp overlap
RAD21 6 datasets
ChIP RH4 GSE83726.RAD21.RH4 207 bp overlap
ChIP SK-N-SH ENCFF747MAS 102 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 405 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 194 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 262 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 192 bp overlap
RARA 2 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 236 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 307 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 323 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 422 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 223 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 537 bp overlap
REST 2 datasets
ChIP SK-N-SH ENCFF861MKH 166 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 122 bp overlap
SATB1 1 dataset
Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 458 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 359 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 349 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 390 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 304 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 215 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 537 bp overlap
SMARCC1 5 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 391 bp overlap
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 483 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 399 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 131 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 297 bp overlap
SMC3 1 dataset
ChIP SK-N-SH ENCFF791WFB 241 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 197 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 99 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 398 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 299 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 537 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 326 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 238 bp overlap
ChIP SK-N-SH ENCFF270OWF 221 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 537 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 537 bp overlap
ChIP SK-N-SH ENCFF754TJT 247 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 128 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 277 bp overlap
TFEB 1 dataset
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
TFEC 1 dataset
Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap
TOX2 3 datasets
ChIP SK-N-SH ENCFF415OYE 180 bp overlap
ChIP SK-N-SH ENCFF415OYE 158 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 111 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 464 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 357 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 357 bp overlap
USF1 3 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 313 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 134 bp overlap
YY1 2 datasets
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 354 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 144 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap