chr2 : 101,893,741 101,894,073
332 bp 92 TFs 0 linked genes
This 332 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:101,888,741 – 101,899,073
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
AGO2 3 datasets
ChIP HepG2 ENCFF252VFI 332 bp overlap
ChIP HepG2 ENCFF773YDL 332 bp overlap
ChIP HepG2 ENCFF773YDL 332 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 332 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 183 bp overlap
BCOR 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 123 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 257 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 264 bp overlap
BRD4 2 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 260 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 257 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 332 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 187 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 270 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 332 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 138 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 332 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 263 bp overlap
CTCF 22 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 237 bp overlap
ChIP A673 ENCFF123WOM 332 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 280 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 256 bp overlap
ChIP H9 ENCFF152GTF 169 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 150 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 99 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 184 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 293 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 223 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 148 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 157 bp overlap
ChIP endodermal cell ENCFF471YCZ 332 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 283 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 146 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 206 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 169 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 234 bp overlap
ChIP neural progenitor cell ENCFF420RBO 329 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 310 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 246 bp overlap
DUX4 1 dataset
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
E2F7 1 dataset
ChIP IMR-90_SENES_SHCTR GSE40343.E2F7.IMR-90_SENES_SHCTR 75 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 261 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 332 bp overlap
EP300 4 datasets
ChIP H1 ENCFF927IYK 283 bp overlap
ChIP Ishikawa ENCFF364ZWT 332 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 299 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 180 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 268 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 332 bp overlap
FLI1 4 datasets
ChIP A-673 GSE99959.FLI1.A-673 329 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 332 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 332 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 263 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 332 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 220 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 332 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 332 bp overlap
ChIP H1 ENCFF939VKA 218 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 289 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 171 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 165 bp overlap
IRF3 1 dataset
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
Irf1 1 dataset
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 255 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 245 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 332 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 172 bp overlap
KLF9 1 dataset
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 55 bp overlap
MAFK 3 datasets
ChIP A549 ENCFF371EPR 105 bp overlap
ChIP HepG2 ENCFF743ZOF 53 bp overlap
ChIP HepG2 ENCFF767LDG 63 bp overlap
MED1 9 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 114 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 83 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 152 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 77 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 93 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 158 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 88 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 153 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 167 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 229 bp overlap
MLLT10 1 dataset
ChIP HepG2 ENCFF596ZVX 277 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 329 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 163 bp overlap
ChIP H1 ENCFF747ZPQ 131 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 332 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 332 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 304 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 332 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 332 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 332 bp overlap
ChIP hESC GSE20650.NANOG.hESC 241 bp overlap
ChIP hESC GSE18292.NANOG.hESC 109 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 267 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 314 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 215 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 52 bp overlap
NIPBL 2 datasets
ChIP hESC GSE64758.NIPBL.hESC 185 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 293 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 213 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 332 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 329 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 332 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 327 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 274 bp overlap
RAD21 11 datasets
ChIP H1 ENCFF698EWO 224 bp overlap
ChIP H1 ENCFF967OJF 221 bp overlap
ChIP Ishikawa ENCFF570JVV 132 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 133 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 217 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 157 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 142 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 211 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 179 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 159 bp overlap
RBM22 1 dataset
ChIP HepG2 ENCFF561IAJ 332 bp overlap
RBPJ 2 datasets
ChIP GIC GSE79734.RBPJ.GIC 132 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 218 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 263 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 104 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 124 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 235 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 235 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 287 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 242 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 321 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 332 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 224 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 262 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 278 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 276 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 277 bp overlap
SOX13 1 dataset
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX14 1 dataset
Motif ES_0h ES_0h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 239 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 269 bp overlap
SOX2 9 datasets
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP H9 GSE46837.SOX2.H9 290 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 303 bp overlap
ChIP hESC GSE69479.SOX2.hESC 285 bp overlap
ChIP hESC GSE18292.SOX2.hESC 168 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 327 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 316 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 332 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 332 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 240 bp overlap
SOX4 1 dataset
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif ES_0h ES_0h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif ES_0h ES_0h-SOX9_MA0077.2 8 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 223 bp overlap
ChIP WTC11 ENCFF688PEU 332 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 212 bp overlap
TCF12 3 datasets
ChIP Ishikawa ENCFF467DDW 332 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 243 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 163 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 221 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 289 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 253 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 107 bp overlap
TFCP2 1 dataset
Motif ES_0h ES_0h-TFCP2_MA1968.2 9 bp overlap
TP53 1 dataset
ChIP H9 GSE39912.TP53.H9 207 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 266 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 267 bp overlap
ZBTB17 1 dataset
Motif ES_0h ES_0h-ZBTB17_MA2102.1 8 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 332 bp overlap
ZBTB6 1 dataset
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZBTB7A 1 dataset
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 140 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 292 bp overlap
ZNF382 1 dataset
Motif ES_0h ES_0h-ZNF382_MA1594.1 24 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 249 bp overlap
ZNF449 1 dataset
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 233 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 306 bp overlap
ZNF547 1 dataset
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap