chrX : 137,848,231 137,848,822
591 bp 165 TFs 0 linked genes
This 591 bp open chromatin element has no linked target genes and is bound by 165 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:137,843,231 – 137,853,822
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
165 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 159 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 298 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Arx 1 dataset
Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BARX1 2 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BARX2 1 dataset
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 224 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 154 bp overlap
BSX 2 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CTCF 1 dataset
ChIP ID00014 GSE76922.CTCF.ID00014 77 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
DLX1 2 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Dlx3 2 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 424 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 197 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 206 bp overlap
EHF 2 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELK4 1 dataset
Motif DE_12h DE_12h-ELK4_MA0076.3 9 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
ERF::HOXB13 2 datasets
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
ESR1 5 datasets
ChIP ZR751 ERP000783.ESR1.ZR751 449 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 217 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 342 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_4 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_4 170 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 337 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 347 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOXA1 7 datasets
ChIP LAPC-4_CST_V5 GSE123618.FOXA1.LAPC-4_CST_V5 306 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 405 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 284 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 328 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 333 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 443 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 199 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 481 bp overlap
ChIP DE DE-FOXA2-2 362 bp overlap
FOXD3 2 datasets
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXE1 2 datasets
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 2 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HESX1 2 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HIF1A 1 dataset
ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 167 bp overlap
HOXA7 2 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
HOXC12 1 dataset
Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap
HOXD11 1 dataset
Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap
Hic1 1 dataset
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
Hmx1 2 datasets
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx2 2 datasets
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hmx3 2 datasets
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 294 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 409 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 300 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 2 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Lhx3 1 dataset
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
MAX 6 datasets
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 399 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 249 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 332 bp overlap
ChIP WTC11 ENCFF223QFY 524 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MSX1 2 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 243 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 220 bp overlap
Msx3 2 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 209 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 551 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 338 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 433 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 326 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 329 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
ChIP hESC GSE20650.NANOG.hESC 189 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nkx3-2 1 dataset
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
Nobox 2 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
ONECUT3 2 datasets
Motif DE_12h DE_12h-ONECUT3_MA0757.2 12 bp overlap
Motif DE_12h DE_12h-ONECUT3_MA0757.2 12 bp overlap
PAX3 1 dataset
Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 224 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 159 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 545 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 409 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 301 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 513 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Pax7 2 datasets
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
RAX 2 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 340 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 426 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 494 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 434 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 289 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 266 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 307 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 291 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX18 1 dataset
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 386 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
SRY 1 dataset
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 272 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 276 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 300 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 137 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 243 bp overlap
ChIP WTC11 ENCFF699QGS 425 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 417 bp overlap
VENTX 2 datasets
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
ZBTB11 1 dataset
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
ZNF8 1 dataset
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap