chr18 : 6,022,705 – 6,023,180

475 bp 106 TFs 0 linked genes

This 475 bp open chromatin element has no linked target genes and is bound by 106 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

106 transcription factors

BCL11A 1 dataset

ChIP WA01 ENCSR000BMJ.BCL11A.WA01 122 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 294 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 219 bp overlap

BRD4 2 datasets

ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 158 bp overlap

ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 135 bp overlap

CEBPA 1 dataset

ChIP MV4-11 GSE88746.CEBPA.MV4-11 399 bp overlap

CEBPB 3 datasets

ChIP H1 ENCFF871PTR 261 bp overlap

ChIP MV4-11 GSE88746.CEBPB.MV4-11 373 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 232 bp overlap

CHD7 2 datasets

ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 315 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 362 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF335XTP 251 bp overlap

Crx 1 dataset

Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap

DMRTA2 1 dataset

Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap

DUX4 1 dataset

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

Dmbx1 1 dataset

Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap

ELF1 1 dataset

ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 267 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 233 bp overlap

ESRRA 2 datasets

Motif DE_36h DE_36h-ESRRA_MA0592.4 9 bp overlap

ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 287 bp overlap

ESRRB 1 dataset

Motif DE_36h DE_36h-ESRRB_MA0141.4 10 bp overlap

EZH2_phosphoT487 2 datasets

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 260 bp overlap

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 262 bp overlap

Esrrg 1 dataset

Motif DE_36h DE_36h-Esrrg_MA0643.2 9 bp overlap

FOS 1 dataset

ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 134 bp overlap

FOSL2 1 dataset

ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 181 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 365 bp overlap

ChIP DE DE-FOXA2-2 387 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 231 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 382 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-2 328 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 314 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 248 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 253 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 314 bp overlap

GSC 1 dataset

Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap

HAND2 1 dataset

Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap

HIF1A 2 datasets

ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 175 bp overlap

ChIP U2OS_trough_DMSO GSE85096.HIF1A.U2OS_trough_DMSO 237 bp overlap

HLF 1 dataset

Motif DE_36h DE_36h-HLF_MA0043.4 9 bp overlap

HOXC13 1 dataset

Motif DE_36h DE_36h-HOXC13_MA0907.2 9 bp overlap

IKZF2 1 dataset

Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap

ISL2 1 dataset

Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap

Isl1 1 dataset

Motif DE_36h DE_36h-Isl1_MA1608.2 7 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 222 bp overlap

JMJD1C 1 dataset

ChIP THP-1 GSE63484.JMJD1C.THP-1 254 bp overlap

JUN 5 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 342 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 312 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 391 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 304 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 371 bp overlap

KMT2A 1 dataset

ChIP SEM GSE83671.KMT2A.SEM 281 bp overlap

LMO2 1 dataset

ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 189 bp overlap

MAFB 1 dataset

ChIP islet ERP004003.MAFB.islet 100 bp overlap

MAX 1 dataset

ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 290 bp overlap

MED1 2 datasets

ChIP U-87MG GSE36354.MED1.U-87MG 235 bp overlap

ChIP myoblast GSE60026.MED1.myoblast 250 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 182 bp overlap

MYB 1 dataset

ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 177 bp overlap

MYC 2 datasets

ChIP HeLa GSE44672.MYC.HeLa 272 bp overlap

ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 166 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 311 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 135 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 273 bp overlap

NEUROD1 1 dataset

Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap

NFIB 1 dataset

Motif DE_36h DE_36h-NFIB_MA1643.2 17 bp overlap

NFIC 1 dataset

Motif DE_36h DE_36h-NFIC_MA1527.2 15 bp overlap

NFIC::TLX1 1 dataset

Motif DE_36h DE_36h-NFICTLX1_MA0119.1 14 bp overlap

NR2C1 1 dataset

Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

Motif DE_36h DE_36h-NR2F1_MA0017.3 12 bp overlap

NR2F2 1 dataset

Motif DE_36h DE_36h-NR2F2_MA1111.2 7 bp overlap

Neurod2 1 dataset

Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap

Nr1H2 1 dataset

Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap

Nr5A2 1 dataset

Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap

OSR2 1 dataset

ChIP HEK293 GSE76494.OSR2.HEK293 249 bp overlap

OTX1 1 dataset

Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap

OTX2 2 datasets

Motif DE_36h DE_36h-OTX2_MA0712.3 7 bp overlap

ChIP WTC11 ENCFF634NAO 245 bp overlap

PAX6 1 dataset

ChIP retina_pigment GSE60024.PAX6.retina_pigment 213 bp overlap

PHOX2A 1 dataset

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

PITX1 1 dataset

Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap

PLAG1 1 dataset

Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap

POU5F1 2 datasets

Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 277 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 302 bp overlap

PPARA::RXRA 1 dataset

Motif DE_36h DE_36h-PPARARXRA_MA1148.2 17 bp overlap

PRDM6 2 datasets

ChIP HEK293 ENCFF283AJL 128 bp overlap

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 151 bp overlap

PROP1 1 dataset

Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap

Ppara 1 dataset

Motif DE_36h DE_36h-Ppara_MA2338.1 7 bp overlap

Ptf1A 1 dataset

Motif DE_36h DE_36h-Ptf1A_MA1618.2 9 bp overlap

RELA 1 dataset

ChIP KB_IL GSE52469.RELA.KB_IL 191 bp overlap

RHOXF1 1 dataset

Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap

RUNX3 1 dataset

Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap

Rarg 1 dataset

Motif DE_36h DE_36h-Rarg_MA0860.1 17 bp overlap

Rxra 1 dataset

Motif DE_36h DE_36h-Rxra_MA0512.2 14 bp overlap

SIX1 1 dataset

Motif DE_36h DE_36h-SIX1_MA1118.2 9 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 320 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 295 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 278 bp overlap

SMAD3 3 datasets

ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap

ChIP BG03 GSE36578.SMAD3.BG03 92 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 143 bp overlap

SMARCA4 2 datasets

ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 209 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 379 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 384 bp overlap

SMARCC1 2 datasets

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 149 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 243 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 248 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 361 bp overlap

STAT1 1 dataset

ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 437 bp overlap

STAT3 4 datasets

ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 155 bp overlap

ChIP SUM159PT GSE152203.STAT3.SUM159PT 88 bp overlap

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 254 bp overlap

ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 187 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 319 bp overlap

TBP 1 dataset

ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 223 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 269 bp overlap

THRA 1 dataset

Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap

THRB 1 dataset

Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap

TP53 1 dataset

ChIP SaOS-2 GSE15780.TP53.SaOS-2 248 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 135 bp overlap

ZBTB32 1 dataset

Motif DE_36h DE_36h-ZBTB32_MA1580.1 10 bp overlap

ZBTB42 1 dataset

ChIP HEK293 GSE76494.ZBTB42.HEK293 173 bp overlap

ZFP3 1 dataset

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 235 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 237 bp overlap

ZNF214 1 dataset

Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap

ZNF257 1 dataset

Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap

ZNF331 1 dataset

Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap

ZNF528 1 dataset

Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap

ZNF770 1 dataset

ChIP HEK293 GSE76494.ZNF770.HEK293 148 bp overlap