chr17 : 21,255,389 – 21,255,820
431 bp 77 TFs 1 linked gene
This 431 bp open chromatin element is linked to NATD1 and is bound by 77 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NATD1 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:21,250,389 – 21,260,820
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 273 bp overlap
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 176 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 210 bp overlap
ChIP K562 ENCFF938UXQ 183 bp overlap
ARNT 2 datasets
ChIP K-562 ENCSR613NUC.ARNT.K-562 182 bp overlap
ChIP K562 ENCFF451RAF 169 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 202 bp overlap
ATF2 1 dataset
ChIP K562 ENCFF139ZZG 52 bp overlap
ATF3 3 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 166 bp overlap
ChIP K-562 ENCSR632DCH.ATF3.K-562 75 bp overlap
ChIP K562 ENCFF604FPV 62 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 431 bp overlap
BCL11A 1 dataset
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 61 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 348 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 77 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 112 bp overlap
CBFA2T2 1 dataset
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 105 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 361 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 96 bp overlap
ChIP K562 ENCFF673OEZ 92 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 153 bp overlap
DDX20 2 datasets
ChIP K-562 ENCSR446LAV.DDX20.K-562 143 bp overlap
ChIP K562 ENCFF205RDN 153 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 431 bp overlap
ChIP K562 ENCFF775HUO 190 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 232 bp overlap
EGR1 1 dataset
ChIP K-562 ENCSR211LTF.EGR1.K-562 221 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 140 bp overlap
ChIP hESC GSE26097.EOMES.hESC 152 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 99 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR302AWT.FOXK2.K-562 76 bp overlap
ChIP K-562 ENCSR508DQA.FOXK2.K-562 66 bp overlap
FOXM1 1 dataset
ChIP K-562 ENCSR429QPP.FOXM1.K-562 250 bp overlap
GABPB1 1 dataset
ChIP K-562 ENCSR138YYY.GABPB1.K-562 106 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 100 bp overlap
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 70 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 417 bp overlap
ChIP erythroblast ENCFF867JAR 267 bp overlap
ChIP erythroblast ENCFF867JAR 53 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 263 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 60 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 112 bp overlap
GATA2 2 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 65 bp overlap
ChIP K562 ENCFF088XQT 63 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 342 bp overlap
ChIP DE DE-GATA4-2 399 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 327 bp overlap
ChIP DE DE-GATA6-2 398 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 293 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 273 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 287 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 308 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 313 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 241 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 224 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 212 bp overlap
ChIP K562 ENCFF928TKZ 132 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 295 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 147 bp overlap
ChIP K562 ENCFF919OMP 148 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 252 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 431 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 390 bp overlap
JUNB 2 datasets
ChIP K-562 ENCSR000DJY.JUNB.K-562 103 bp overlap
ChIP K-562 ENCSR525VAT.JUNB.K-562 77 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 103 bp overlap
LCOR 1 dataset
ChIP K562 ENCFF340MHH 146 bp overlap
LDB1 2 datasets
ChIP K-562 GSE142227.LDB1.K-562 145 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 107 bp overlap
LEF1 2 datasets
ChIP K-562 ENCSR343ELW.LEF1.K-562 267 bp overlap
ChIP K562 ENCFF198WCP 226 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 261 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 203 bp overlap
MNT 2 datasets
ChIP K-562 ENCSR512NLO.MNT.K-562 109 bp overlap
ChIP K562 ENCFF820IGH 133 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 162 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 410 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR914NEI.MTA3.K-562 146 bp overlap
ChIP K-562 ENCSR180NCY.MTA3.K-562 115 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 431 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 300 bp overlap
ChIP hESC GSE18292.NANOG.hESC 90 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 236 bp overlap
NCOA1 1 dataset
ChIP K562 ENCFF395XLS 52 bp overlap
NFATC3 2 datasets
ChIP K-562 ENCSR051OUX.NFATC3.K-562 153 bp overlap
ChIP K562 ENCFF078EKB 154 bp overlap
NR2F1 1 dataset
ChIP K562 ENCFF221HJH 102 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 113 bp overlap
PKNOX1 1 dataset
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 280 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 77 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 431 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 310 bp overlap
PYGO2 1 dataset
ChIP K-562 ENCSR431XGJ.PYGO2.K-562 103 bp overlap
RAD51 1 dataset
ChIP K-562 ENCSR524BUE.RAD51.K-562 182 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 431 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 323 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 301 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 306 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 410 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 431 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 431 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 255 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 253 bp overlap
ChIP K562 ENCFF316MCJ 108 bp overlap
SMARCC2 2 datasets
ChIP K-562 ENCSR519WMW.SMARCC2.K-562 86 bp overlap
ChIP K562 ENCFF368GSR 129 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 235 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 302 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 320 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 58 bp overlap
ChIP K562 ENCFF059YCJ 60 bp overlap
TAL1 2 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 254 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 224 bp overlap
TCF12 3 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 276 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 129 bp overlap
ChIP K562 ENCFF909RDY 107 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 83 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF254RJL 171 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 124 bp overlap
ChIP K562 ENCFF284DKY 89 bp overlap
TRIM28 1 dataset
ChIP K-562 ENCSR474CVP.TRIM28.K-562 247 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 283 bp overlap
ChIP K562 ENCFF053XDV 390 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 135 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 245 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 50 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 94 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 431 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 169 bp overlap
ZFP91 1 dataset
ChIP K-562 ENCSR898XMH.ZFP91.K-562 238 bp overlap
ZNF24 1 dataset
ChIP K562 ENCFF877JCX 83 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 135 bp overlap
ZNF770 1 dataset
ChIP HEK293 ENCFF468FCG 109 bp overlap
ZSCAN29 4 datasets
ChIP K-562 ENCSR175SZH.ZSCAN29.K-562 195 bp overlap
ChIP K-562 ENCSR635EXI.ZSCAN29.K-562 66 bp overlap
ChIP K562 ENCFF797SOU 57 bp overlap
ChIP K562 ENCFF842XOY 101 bp overlap
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