chr15 : 86,572,081 86,572,858
777 bp 88 TFs 0 linked genes
This 777 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:86,567,081 – 86,577,858
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
AR 3 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 192 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 371 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 140 bp overlap
ARID1B 1 dataset
ChIP MCF-7_shJUN GSE128445.ARID1B.MCF-7_shJUN 232 bp overlap
ARNT 1 dataset
ChIP 501-mel GSE95280.ARNT.501-mel 343 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 777 bp overlap
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 642 bp overlap
BRD4 8 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 550 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 306 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 226 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 370 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 448 bp overlap
ChIP hESC GSE33281.BRD4.hESC 113 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 400 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 205 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 424 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 315 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 200 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 349 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 53 bp overlap
CTCF 7 datasets
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 240 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 591 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 362 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 61 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 451 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 326 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 228 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 161 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 213 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 222 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 94 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 305 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 213 bp overlap
ESR1 7 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 436 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 83 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 433 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 731 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 283 bp overlap
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 109 bp overlap
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 108 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 164 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 121 bp overlap
EZH2 4 datasets
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 280 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 257 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 325 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 195 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 323 bp overlap
FOXA1 3 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 777 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 485 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 715 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 299 bp overlap
GABPA 1 dataset
ChIP SK-N-SH ENCSR000BTG.GABPA.SK-N-SH 109 bp overlap
GATA2 5 datasets
ChIP SH-SY5Y ENCFF485YIB 215 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 201 bp overlap
ChIP SK-N-SH ENCFF764OZD 210 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 112 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 339 bp overlap
GATA4 3 datasets
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 96 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 82 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 143 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 280 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 215 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 220 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 756 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 570 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 148 bp overlap
HEXIM1 2 datasets
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 363 bp overlap
HEY2 1 dataset
ChIP hiPSC GSE81585.HEY2.hiPSC 72 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 208 bp overlap
JUN 2 datasets
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 181 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 291 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 98 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 297 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 469 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 428 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 141 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 459 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 434 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 160 bp overlap
MXI1 4 datasets
ChIP SK-N-SH ENCFF746HVJ 292 bp overlap
ChIP SK-N-SH ENCFF746HVJ 491 bp overlap
ChIP SK-N-SH ENCFF746HVJ 432 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 78 bp overlap
MYC 4 datasets
ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 262 bp overlap
ChIP Kelly GSE138295.MYC.Kelly 307 bp overlap
ChIP NB69 GSE138295.MYC.NB69 324 bp overlap
ChIP NB69 GSE138295.MYC.NB69 218 bp overlap
MYCN 11 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 519 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 174 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 158 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 414 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 299 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 176 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 405 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 763 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 777 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 118 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 143 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 396 bp overlap
NFKBIA 1 dataset
ChIP dermal GSE30082.NFKBIA.dermal 383 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 222 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 190 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 777 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 757 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 597 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 565 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 238 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 732 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 166 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 269 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 239 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 498 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RAD21 1 dataset
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 234 bp overlap
RAD51 1 dataset
ChIP U2OS_CX-5461 GSE90967.RAD51.U2OS_CX-5461 237 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 134 bp overlap
RELA 2 datasets
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 313 bp overlap
ChIP HEK293_TNF-30min GSE75562.RELA.HEK293_TNF-30min 272 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCFF861MKH 117 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 178 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 308 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
RXR 2 datasets
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 198 bp overlap
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 360 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 605 bp overlap
SMARCA4 5 datasets
ChIP NGP GSE134626.SMARCA4.NGP 314 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 237 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 60 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 192 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 143 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 198 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 211 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 423 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 178 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 709 bp overlap
TARDBP 3 datasets
ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 190 bp overlap
ChIP Hep-G2 GSE120104.TARDBP.Hep-G2 152 bp overlap
ChIP HepG2 ENCFF132LKJ 411 bp overlap
TBX5 3 datasets
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 289 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 109 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 129 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 83 bp overlap
ChIP SK-N-SH ENCFF270OWF 200 bp overlap
TFAP2B 2 datasets
ChIP SK-N-SH ENCFF869XXQ 201 bp overlap
ChIP SK-N-SH ENCFF869XXQ 228 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 290 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 207 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 410 bp overlap
TRIM28 2 datasets
ChIP HCT-116 GSE72622.TRIM28.HCT-116 231 bp overlap
ChIP HCT-116 GSE72622.TRIM28.HCT-116 243 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 94 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 460 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 477 bp overlap
ZBTB7B 1 dataset
Motif DE_12h DE_12h-ZBTB7B_MA0694.2 10 bp overlap
ZBTB7C 1 dataset
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 291 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 152 bp overlap