chr13 : 108,595,494 – 108,596,163

669 bp 98 TFs 1 linked gene

This 669 bp open chromatin element is linked to MYO16 and is bound by 98 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
MYO16		at TSS	At TSS	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

98 transcription factors

ASCL1 1 dataset

Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap

ATF2 2 datasets

ChIP GM12878 ENCFF521LQJ 431 bp overlap

ChIP GM12878 ENCSR000BQK.ATF2.GM12878 219 bp overlap

ATF7 1 dataset

ChIP GM12878 ENCSR014YCR.ATF7.GM12878 336 bp overlap

Ahr::Arnt 1 dataset

Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap

BATF 1 dataset

ChIP GM12878 ENCFF954REE 207 bp overlap

BATF3 2 datasets

ChIP GM12878 GSE97661.BATF3.GM12878 211 bp overlap

ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 325 bp overlap

BCL11A 2 datasets

ChIP GM12878 ENCFF717YPR 164 bp overlap

ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 289 bp overlap

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 219 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 169 bp overlap

BHLHE40 4 datasets

ChIP GM12878 ENCFF010ZUU 331 bp overlap

ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 552 bp overlap

ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 469 bp overlap

ChIP GM12878 ENCSR000DZJ.BHLHE40.GM12878 199 bp overlap

BMI1 1 dataset

ChIP GM12878 ENCSR469WII.BMI1.GM12878 468 bp overlap

BRD4 1 dataset

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 162 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 272 bp overlap

CDX2 1 dataset

Motif DE_60h DE_60h-CDX2_MA0465.3 8 bp overlap

CDX4 1 dataset

Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 252 bp overlap

CTCF 2 datasets

Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap

Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap

CTCFL 1 dataset

Motif DE_60h DE_60h-CTCFL_MA1102.3 8 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 115 bp overlap

DPF2 2 datasets

ChIP GM12878 ENCFF681AJV 284 bp overlap

ChIP GM12878 ENCSR509FWH.DPF2.GM12878 556 bp overlap

EOMES 2 datasets

Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 256 bp overlap

EZH2 2 datasets

ChIP THP-1 GSE135024.EZH2.THP-1 223 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 156 bp overlap

FIGLA 1 dataset

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 300 bp overlap

ChIP DE DE-FOXA2-2 349 bp overlap

FOXM1 1 dataset

ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 151 bp overlap

GABPA 2 datasets

ChIP GM12878 ENCFF872TWR 368 bp overlap

ChIP GM12878 ENCSR331HPA.GABPA.GM12878 157 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 275 bp overlap

ChIP DE DE-GATA4-2 349 bp overlap

ChIP foregut GSE117136.GATA4.foregut 283 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-1 243 bp overlap

ChIP DE DE-GATA6-2 393 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 250 bp overlap

HNF1B 1 dataset

ChIP foregut GSE117136.HNF1B.foregut 191 bp overlap

HOXB13 2 datasets

Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap

ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 171 bp overlap

Hoxa13 1 dataset

Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap

Hoxd13 1 dataset

Motif DE_60h DE_60h-Hoxd13_MA0909.4 7 bp overlap

IKZF1 4 datasets

ChIP GM12878 ENCFF616FJX 571 bp overlap

ChIP GM12878 ENCFF753XDO 264 bp overlap

ChIP GM12878 ENCFF824TGK 186 bp overlap

ChIP GM12878 ENCFF824TGK 215 bp overlap

IKZF2 4 datasets

ChIP GM12878 ENCFF238LYK 165 bp overlap

ChIP GM12878 ENCFF918AID 415 bp overlap

ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 339 bp overlap

ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 316 bp overlap

IRF4 3 datasets

ChIP GM12878 ENCFF769ZDL 289 bp overlap

ChIP GM12878 ENCSR000BGY.IRF4.GM12878 284 bp overlap

ChIP T-cell GSE136853.IRF4.T-cell 297 bp overlap

JUNB 2 datasets

ChIP GM12878 ENCFF667EJQ 212 bp overlap

ChIP GM12878 ENCSR897MMC.JUNB.GM12878 403 bp overlap

JUND 3 datasets

ChIP GM12878 ENCSR000DYS.JUND.GM12878 137 bp overlap

ChIP H1 ENCFF468JZD 196 bp overlap

ChIP WA01 ENCSR000BKP.JUND.WA01 164 bp overlap

KLF11 1 dataset

Motif DE_60h DE_60h-KLF11_MA1512.2 10 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MEIS2 2 datasets

Motif DE_60h DE_60h-MEIS2_MA0774.1 8 bp overlap

Motif DE_60h DE_60h-MEIS2_MA1640.2 9 bp overlap

MEIS3 1 dataset

Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap

MLLT1 1 dataset

ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 392 bp overlap

MTA2 2 datasets

ChIP GM12878 ENCFF615CWQ 308 bp overlap

ChIP GM12878 ENCSR293QAR.MTA2.GM12878 600 bp overlap

MTA3 1 dataset

ChIP GM12878 ENCSR000BRH.MTA3.GM12878 162 bp overlap

NFATC3 1 dataset

ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 496 bp overlap

NFE2 1 dataset

ChIP K-562 ENCSR000FCC.NFE2.K-562 123 bp overlap

NFIC 2 datasets

ChIP GM12878 ENCFF259FWL 470 bp overlap

ChIP GM12878 ENCSR000BRN.NFIC.GM12878 278 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 397 bp overlap

NR2F1 2 datasets

ChIP GM12878 ENCFF273VKX 216 bp overlap

ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 342 bp overlap

NRIP1 1 dataset

ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 99 bp overlap

PAX5 2 datasets

ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 239 bp overlap

ChIP GM12878 ENCSR000BHD.PAX5.GM12878 205 bp overlap

PBX2 1 dataset

Motif DE_60h DE_60h-PBX2_MA1113.3 9 bp overlap

PBX3 1 dataset

ChIP GM12878 ENCSR000BGR.PBX3.GM12878 104 bp overlap

POLR2A 1 dataset

ChIP H1 ENCFF833NJP 207 bp overlap

PRDM14 2 datasets

ChIP NCCIT GSE71675.PRDM14.NCCIT 275 bp overlap

ChIP hESC GSE138674.PRDM14.hESC 204 bp overlap

RAD51 1 dataset

ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 261 bp overlap

RBBP4 1 dataset

ChIP RH5 GSE155861.RBBP4.RH5 224 bp overlap

RELB 2 datasets

ChIP GM12878 ENCFF217ADF 489 bp overlap

ChIP GM12878 ENCSR387QUV.RELB.GM12878 359 bp overlap

RNF2 1 dataset

ChIP WA01 GSE104690.RNF2.WA01 255 bp overlap

RUNX3 1 dataset

ChIP GM12878 ENCFF395WHA 234 bp overlap

SAP30 1 dataset

ChIP WA01 ENCSR000ATR.SAP30.WA01 184 bp overlap

SKIL 1 dataset

ChIP GM12878 ENCSR212YKD.SKIL.GM12878 404 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 222 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 441 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 288 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 217 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 220 bp overlap

SMARCA4 1 dataset

ChIP NSC GSE125033.SMARCA4.NSC 458 bp overlap

SNAI1 1 dataset

Motif DE_60h DE_60h-SNAI1_MA1558.2 7 bp overlap

SNAI3 1 dataset

Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap

SP9 1 dataset

Motif DE_60h DE_60h-SP9_MA1564.2 10 bp overlap

SRF 1 dataset

ChIP GM12878 ENCSR000BMI.SRF.GM12878 154 bp overlap

STAT1 1 dataset

Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap

STAT3 1 dataset

Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap

Smad4 1 dataset

Motif DE_60h DE_60h-Smad4_MA1153.2 7 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 188 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 178 bp overlap

TARDBP 1 dataset

ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 403 bp overlap

TBR1 1 dataset

Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap

TBX18 1 dataset

Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap

TBX21 1 dataset

Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap

TCF12 5 datasets

Motif DE_60h DE_60h-TCF12_MA1648.2 7 bp overlap

ChIP GM12878 ENCFF433DMU 311 bp overlap

ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 214 bp overlap

ChIP H1 ENCFF203EBH 217 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 229 bp overlap

TCF3 1 dataset

Motif DE_60h DE_60h-TCF3_MA0522.4 7 bp overlap

TCF4 1 dataset

Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap

TCF7 2 datasets

ChIP GM12878 ENCFF749DPM 321 bp overlap

ChIP GM12878 ENCSR501DKS.TCF7.GM12878 258 bp overlap

TRIM22 1 dataset

ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 482 bp overlap

ZEB1 1 dataset

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZNF135 1 dataset

Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap

ZNF217 1 dataset

ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 365 bp overlap

ZNF22 1 dataset

ChIP HEK293 GSE76494.ZNF22.HEK293 226 bp overlap

ZNF274 1 dataset

ChIP WA01 ENCSR000EUN.ZNF274.WA01 223 bp overlap

ZNF384 1 dataset

ChIP GM12878 ENCFF229VSP 321 bp overlap

ZNF677 1 dataset

Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap

ZNF682 1 dataset

Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap

ZNF684 1 dataset

Motif DE_60h DE_60h-ZNF684_MA1600.2 14 bp overlap

Zic1::Zic2 1 dataset

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap