chr12 : 115,474,615 115,474,947
332 bp 81 TFs 0 linked genes
This 332 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:115,469,615 – 115,479,947
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 268 bp overlap
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 242 bp overlap
AR 1 dataset
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 225 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 284 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 201 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 146 bp overlap
ATXN7L3 1 dataset
ChIP HCT-116_thaps GSE121798.ATXN7L3.HCT-116_thaps 223 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 332 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 273 bp overlap
BRD4 4 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 332 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 167 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 332 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 69 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 332 bp overlap
CDX2 5 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 332 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 271 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 332 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 332 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 332 bp overlap
CEBPB 1 dataset
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 138 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF956TPS 66 bp overlap
CREBBP 2 datasets
ChIP LS180 GSE39277.CREBBP.LS180 332 bp overlap
ChIP LS180_125 GSE39277.CREBBP.LS180_125 261 bp overlap
CTCF 6 datasets
ChIP Peyer's patch ENCFF701KWW 224 bp overlap
ChIP Peyer's patch ENCFF746TCR 274 bp overlap
ChIP Peyer's patch ENCFF828IDE 247 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 173 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 162 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 151 bp overlap
CTNNB1 2 datasets
ChIP LS180 GSE31939.CTNNB1.LS180 332 bp overlap
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 332 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 53 bp overlap
ChIP BLaER1 ENCFF262VBH 209 bp overlap
ChIP BLaER1 ENCFF274GAT 332 bp overlap
ChIP BLaER1 ENCFF364PUR 128 bp overlap
E2F1 2 datasets
ChIP MCF-7 ENCFF692OYJ 145 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 98 bp overlap
ERG 2 datasets
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 332 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 240 bp overlap
ESR1 7 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 287 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 69 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 152 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 57 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 68 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 52 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 306 bp overlap
ETS1 1 dataset
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 97 bp overlap
EZH2 1 dataset
ChIP hepatocyte ENCFF118DKH 332 bp overlap
FOSL1 2 datasets
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 147 bp overlap
ChIP HCT116 ENCFF540ZXN 297 bp overlap
FOXA1 21 datasets
ChIP LS180 GSE140533.FOXA1.LS180 332 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 147 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 127 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 95 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 70 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 101 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 110 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 70 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 100 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 81 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 175 bp overlap
ChIP MCF-7_shNR2F2 GSE132432.FOXA1.MCF-7_shNR2F2 223 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 109 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 185 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 80 bp overlap
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 73 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 133 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 133 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 93 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 131 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 68 bp overlap
FOXA2 6 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 322 bp overlap
ChIP DE DE-FOXA2-1 258 bp overlap
ChIP DE DE-FOXA2-2 321 bp overlap
ChIP HepG2 ENCFF533COJ 168 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 95 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 117 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF178GBS 63 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 167 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 332 bp overlap
ChIP DE DE-GATA4-2 332 bp overlap
ChIP ESO-26 GSE132813.GATA4.ESO-26 332 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 285 bp overlap
ChIP KATO-III GSE51705.GATA4.KATO-III 332 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 314 bp overlap
ChIP foregut GSE117136.GATA4.foregut 326 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 332 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 332 bp overlap
GATA6 21 datasets
ChIP AGS GSE51705.GATA6.AGS 332 bp overlap
ChIP AGS GSE51936.GATA6.AGS 111 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 299 bp overlap
ChIP DE DE-GATA6-1 332 bp overlap
ChIP DE DE-GATA6-2 332 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 332 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 332 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 332 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 332 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 332 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 332 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 332 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 300 bp overlap
ChIP KATO-III GSE51705.GATA6.KATO-III 332 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 332 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 332 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 332 bp overlap
ChIP foregut GSE117136.GATA6.foregut 308 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 247 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 306 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 332 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 118 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 200 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 315 bp overlap
HNF4A 7 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 332 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 109 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 332 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 332 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 332 bp overlap
ChIP LoVo_PHASEM GSE51290.HNF4A.LoVo_PHASEM 219 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 303 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 332 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 255 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 240 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 284 bp overlap
JUND 5 datasets
ChIP GP5D GSE51234.JUND.GP5D 332 bp overlap
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 332 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 154 bp overlap
ChIP HCT116 ENCFF748ZQX 283 bp overlap
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 209 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 205 bp overlap
KLF5 5 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 332 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 332 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 221 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 332 bp overlap
ChIP LoVo_PHASES GSE51290.KLF5.LoVo_PHASES 323 bp overlap
MAX 2 datasets
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 69 bp overlap
ChIP HCT116 ENCFF810LEN 221 bp overlap
MED1 2 datasets
ChIP LS180 GSE39277.MED1.LS180 137 bp overlap
ChIP LS180_125 GSE39277.MED1.LS180_125 332 bp overlap
MYC 4 datasets
ChIP GP5D GSE51234.MYC.GP5D 332 bp overlap
ChIP LS174T_BI8622 GSE59223.MYC.LS174T_BI8622 110 bp overlap
ChIP LoVo_PHASES GSE51290.MYC.LoVo_PHASES 96 bp overlap
ChIP LoVo_PHASES GSE51290.MYC.LoVo_PHASES 193 bp overlap
NCOA1 2 datasets
ChIP LS180 GSE39277.NCOA1.LS180 259 bp overlap
ChIP LS180_125 GSE39277.NCOA1.LS180_125 332 bp overlap
NCOR1 2 datasets
ChIP LS180 GSE39277.NCOR1.LS180 232 bp overlap
ChIP LS180_125 GSE39277.NCOR1.LS180_125 332 bp overlap
NCOR2 2 datasets
ChIP LS180 GSE39277.NCOR2.LS180 99 bp overlap
ChIP LS180_125 GSE39277.NCOR2.LS180_125 105 bp overlap
NIPBL 2 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 332 bp overlap
ChIP GP5D_SIRAD21 GSE51234.NIPBL.GP5D_SIRAD21 302 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 332 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 332 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 227 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 332 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 161 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 332 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 177 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 279 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 180 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 332 bp overlap
POLR2A 2 datasets
ChIP stomach ENCFF607ZPU 288 bp overlap
ChIP stomach ENCFF820WZN 136 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 332 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 332 bp overlap
ChIP OE33 GSE143195.PPARG.OE33 332 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 109 bp overlap
RAD21 2 datasets
ChIP GP5D GSE51234.RAD21.GP5D 332 bp overlap
ChIP GP5D_SIRAD21 GSE51234.RAD21.GP5D_SIRAD21 279 bp overlap
RELA 2 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 332 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 254 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 240 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 217 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 182 bp overlap
RXR 2 datasets
ChIP LS180 GSE31939.RXR.LS180 332 bp overlap
ChIP LS180_125 GSE31939.RXR.LS180_125 332 bp overlap
SFPQ 1 dataset
ChIP LTAD_EtOH GSE94577.SFPQ.LTAD_EtOH 196 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 332 bp overlap
SMAD3 1 dataset
ChIP HCC1954 GSE104760.SMAD3.HCC1954 304 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 332 bp overlap
SMARCA4 2 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 204 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 63 bp overlap
SMARCB1 2 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 54 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 83 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 332 bp overlap
SOX9 1 dataset
ChIP HT29 GSE63629.SOX9.HT29 332 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 155 bp overlap
ChIP HCT116 ENCFF800LBN 313 bp overlap
STAT3 4 datasets
ChIP HCC70 GSE152203.STAT3.HCC70 143 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 172 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 296 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 185 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 332 bp overlap
TCF4 2 datasets
ChIP LS180 GSE31939.TCF4.LS180 312 bp overlap
ChIP LS180_125 GSE31939.TCF4.LS180_125 332 bp overlap
TCF7L2 6 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 180 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 192 bp overlap
ChIP HCT-116_WT GSE127960.TCF7L2.HCT-116_WT 218 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 263 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 229 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 332 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 199 bp overlap
TP53 2 datasets
ChIP HCT-116_Nutlin3a GSE125927.TP53.HCT-116_Nutlin3a 332 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 332 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 68 bp overlap
VDR 1 dataset
ChIP LS180_125 GSE31939.VDR.LS180_125 332 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 129 bp overlap
ZEB1 1 dataset
ChIP Hep-G2 ENCSR000BVN.ZEB1.Hep-G2 178 bp overlap
ZNF652 2 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 50 bp overlap
ChIP HepG2 ENCFF331VPZ 140 bp overlap