chr1 : 208,445,679 208,446,386
707 bp 85 TFs 0 linked genes
This 707 bp open chromatin element has no linked target genes and is bound by 85 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:208,440,679 – 208,451,386
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AR 19 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 51 bp overlap
ChIP VCaP GSE148358.AR.VCaP 99 bp overlap
ChIP VCaP GSE83650.AR.VCaP 84 bp overlap
ChIP VCaP GSE98809.AR.VCaP 84 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 100 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 129 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 299 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 303 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 249 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 241 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 69 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 82 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 98 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 81 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 98 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 87 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 66 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 106 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 97 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 236 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 79 bp overlap
BAF155 3 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 160 bp overlap
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 77 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 74 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 174 bp overlap
BRD4 6 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 134 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 54 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 149 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 87 bp overlap
ChIP VCaP_Darolutamide GSE148358.BRD4.VCaP_Darolutamide 66 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 145 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 50 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 198 bp overlap
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 85 bp overlap
ChIP K562 ENCFF673OEZ 411 bp overlap
CDX2 1 dataset
ChIP LS180_125 GSE31939.CDX2.LS180_125 133 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCFF669KMB 128 bp overlap
CTCF 10 datasets
ChIP BE2C ENCFF757SRF 317 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 237 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 123 bp overlap
ChIP endodermal cell ENCFF471YCZ 410 bp overlap
ChIP esophagus squamous epithelium ENCFF571ODZ 365 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 292 bp overlap
ChIP esophagus_squamous-epithelium ENCSR003SZZ.CTCF.esophagus_squamous-epithelium 218 bp overlap
ChIP nephron ENCFF411ACD 491 bp overlap
ChIP nephron ENCFF972IQB 465 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF006PJY 245 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 222 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 227 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 120 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 77 bp overlap
ERG 10 datasets
ChIP VCaP GSE28950.ERG.VCaP 121 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 98 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 98 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 123 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 86 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 68 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 81 bp overlap
ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 78 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 98 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 125 bp overlap
ESR1 2 datasets
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 174 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 75 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 104 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 428 bp overlap
FOXA1 9 datasets
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 50 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 183 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 138 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 57 bp overlap
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 325 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 59 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 198 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 258 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 176 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 435 bp overlap
ChIP DE DE-FOXA2-2 473 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 105 bp overlap
GABPA 2 datasets
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 86 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 79 bp overlap
GATA2 7 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 269 bp overlap
ChIP SK-N-SH ENCFF764OZD 148 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 106 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 60 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 123 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 123 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 111 bp overlap
GATA3 4 datasets
ChIP Kelly GSE65664.GATA3.Kelly 91 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 72 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 89 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 57 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 338 bp overlap
ChIP DE DE-GATA4-1 77 bp overlap
ChIP DE DE-GATA4-2 707 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 116 bp overlap
ChIP foregut GSE117136.GATA4.foregut 107 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 100 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 445 bp overlap
ChIP DE DE-GATA6-1 54 bp overlap
ChIP DE DE-GATA6-2 707 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 136 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 339 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 446 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 80 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 118 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 50 bp overlap
ChIP K562 ENCFF968WBH 138 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 405 bp overlap
HOXB13 3 datasets
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 57 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 57 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 56 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 579 bp overlap
ChIP K562 ENCFF348IBL 201 bp overlap
ChIP K562 ENCFF771OHZ 283 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 93 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 277 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 110 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 454 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 666 bp overlap
MAFF 1 dataset
ChIP K562 ENCFF071YKK 281 bp overlap
MAFG 2 datasets
ChIP K562 ENCFF455EEO 166 bp overlap
ChIP K562 ENCFF455EEO 445 bp overlap
MAFK 1 dataset
ChIP K562 ENCFF380WHM 281 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 62 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 62 bp overlap
MED1 1 dataset
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 367 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 349 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 74 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 115 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 64 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF866HRM 90 bp overlap
NFE2 4 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 354 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 298 bp overlap
ChIP K562 ENCFF047YKA 320 bp overlap
ChIP K562 ENCFF163BSI 180 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 377 bp overlap
NFE2L2 2 datasets
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 124 bp overlap
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 194 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 103 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 524 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCFF875BDB 149 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF286KMN 100 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 278 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 99 bp overlap
PPARG 1 dataset
ChIP SGBS GSE41629.PPARG.SGBS 111 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 104 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 359 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 129 bp overlap
RELA 9 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 63 bp overlap
ChIP HUVEC-C_TNF GSE53998.RELA.HUVEC-C_TNF 129 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 62 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 126 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 113 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 73 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 86 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 126 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 67 bp overlap
REST 1 dataset
ChIP PFSK-1 ENCFF845VHA 128 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 112 bp overlap
SETDB1 4 datasets
ChIP HEK293 ENCFF676PLV 646 bp overlap
ChIP HEK293 ENCFF676PLV 446 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 695 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 695 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 575 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 450 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 69 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 510 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 343 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 251 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 134 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 61 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 104 bp overlap
TCF4 1 dataset
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 62 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 88 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 225 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 360 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 417 bp overlap
ZNF549 4 datasets
ChIP HEK293 ENCFF528IUI 72 bp overlap
ChIP HEK293 ENCFF565EYY 144 bp overlap
ChIP HEK293 ENCSR185QFX.ZNF549.HEK293 269 bp overlap
ChIP HEK293 GSE76494.ZNF549.HEK293 150 bp overlap
ZNF564 1 dataset
ChIP HepG2 ENCFF364ZIM 620 bp overlap