chr12 : 6,773,635 6,773,979
344 bp 91 TFs 2 linked genes
This 344 bp open chromatin element is linked to LAG3 and PTMS and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LAG3 1.1 kb Proximal Proximity
PTMS 7.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:6,768,635 – 6,778,979
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
AGO1 4 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 220 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 220 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 185 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 148 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 66 bp overlap
ChIP HepG2 ENCFF773YDL 270 bp overlap
AR 2 datasets
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 86 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 123 bp overlap
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 344 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 68 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 344 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 68 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 262 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 344 bp overlap
BRD4 9 datasets
ChIP CD4_Th1_BAY GSE62482.BRD4.CD4_Th1_BAY 82 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 163 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 97 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 344 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 321 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 131 bp overlap
ChIP hESC GSE33281.BRD4.hESC 79 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 172 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 343 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 193 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 239 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 67 bp overlap
CLOCK 1 dataset
ChIP BA10_2 GSE96659.CLOCK.BA10_2 138 bp overlap
CTCF 3 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 220 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 197 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 166 bp overlap
CTCFL 2 datasets
ChIP K-562 GSE70764.CTCFL.K-562 245 bp overlap
ChIP delta-47 GSE70764.CTCFL.delta-47 203 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 344 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 102 bp overlap
E2F5 1 dataset
ChIP WTC11 ENCFF449LLF 344 bp overlap
E2F6 2 datasets
ChIP WA01 ENCSR000BSI.E2F6.WA01 106 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 99 bp overlap
ELF1 1 dataset
ChIP ME-1 GSE46044.ELF1.ME-1 195 bp overlap
ERG 4 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 203 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 319 bp overlap
ChIP K-562 GSE23730.ERG.K-562 224 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 234 bp overlap
ESR1 1 dataset
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 234 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 317 bp overlap
ChIP WTC11 ENCFF812SCD 68 bp overlap
EZH2 15 datasets
ChIP B cell ENCFF803EMO 186 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 316 bp overlap
ChIP GM23338 ENCFF613YON 61 bp overlap
ChIP H1 ENCFF232NZA 344 bp overlap
ChIP H1 ENCFF232NZA 247 bp overlap
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 248 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 344 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 344 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 170 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 344 bp overlap
ChIP hESC GSE113817.EZH2.hESC 331 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 188 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 344 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 188 bp overlap
ChIP neural progenitor cell ENCFF472NFV 344 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 228 bp overlap
FOXP1 2 datasets
ChIP WTC11 ENCFF338WGC 293 bp overlap
ChIP WTC11 ENCFF338WGC 301 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 182 bp overlap
GATAD2B 2 datasets
ChIP GM12878 ENCFF781IAU 192 bp overlap
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 166 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 344 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 218 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 144 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 292 bp overlap
HMGB1 1 dataset
ChIP HUVEC-C GSE98245.HMGB1.HUVEC-C 308 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 132 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 83 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 344 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 344 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 180 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 211 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 344 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 189 bp overlap
KDM4A 6 datasets
ChIP H1 ENCFF078LED 344 bp overlap
ChIP H1 ENCFF078LED 274 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 246 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 306 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 301 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 340 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 247 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 121 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 71 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 255 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 220 bp overlap
MAX 2 datasets
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 182 bp overlap
ChIP WTC11 ENCFF223QFY 273 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 161 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 167 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 336 bp overlap
NANOG 3 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 170 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 187 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 182 bp overlap
NCAPH2 3 datasets
ChIP HEK293 GSE97540.NCAPH2.HEK293 324 bp overlap
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 198 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 236 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 229 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 344 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 344 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 73 bp overlap
PAX5 2 datasets
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 124 bp overlap
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 185 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 344 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 145 bp overlap
POLR2A 1 dataset
ChIP GM19193 ENCFF599VTO 252 bp overlap
POU5F1 5 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 112 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 130 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 344 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 344 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 273 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 292 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 344 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 194 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 135 bp overlap
ChIP HepG2 ENCFF939HTZ 172 bp overlap
RNF2 3 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 51 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 267 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 344 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 344 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 344 bp overlap
RUNX1 2 datasets
ChIP ME-1 GSE46044.RUNX1.ME-1 293 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 268 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 344 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 258 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 138 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 149 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 275 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 220 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 308 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 159 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 344 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 196 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 199 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 344 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 344 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 86 bp overlap
SUZ12 7 datasets
ChIP H1 ENCFF881NFR 321 bp overlap
ChIP H1 ENCFF881NFR 344 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 106 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 241 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 316 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 344 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 344 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 63 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 89 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 297 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 285 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 332 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 344 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 251 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 344 bp overlap
YY1 4 datasets
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 158 bp overlap
ChIP H1 ENCFF524BTL 219 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 344 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 161 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 179 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 344 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 220 bp overlap
ZNF649 1 dataset
ChIP HEK293T GSE78099.ZNF649.HEK293T 309 bp overlap