chr11 : 99,370,891 99,371,072
181 bp 88 TFs 0 linked genes
This 181 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:99,365,891 – 99,376,072
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 181 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 170 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 145 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 126 bp overlap
ARID1A 3 datasets
ChIP 12Z GSE129781.ARID1A.12Z 181 bp overlap
ChIP NGP GSE134626.ARID1A.NGP 181 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 150 bp overlap
ASCL1 1 dataset
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 62 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BRD2 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 181 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 181 bp overlap
BRD4 30 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 181 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 164 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 68 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 68 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 93 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 123 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 123 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 93 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 83 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 83 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 181 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 95 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 171 bp overlap
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 181 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 181 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 181 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 181 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 181 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 181 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 181 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 150 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 181 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 165 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 108 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 181 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 181 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 181 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 107 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 181 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 181 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 118 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 181 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 181 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 181 bp overlap
CTCF 3 datasets
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 167 bp overlap
ChIP islet ERP004003.CTCF.islet 150 bp overlap
ChIP islet GSE23784.CTCF.islet 116 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 94 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 181 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 135 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 144 bp overlap
ChIP HeLa-S3 ENCFF829XRF 159 bp overlap
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 122 bp overlap
ChIP IMR-90 ENCFF179EDA 178 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 108 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE46166.FOSL1.BT-549 181 bp overlap
FOSL2 4 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 72 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 181 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 181 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 181 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 53 bp overlap
GATA2 2 datasets
ChIP ESF GSE108408.GATA2.ESF 63 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 181 bp overlap
GATA3 2 datasets
ChIP BE2C GSE65664.GATA3.BE2C 134 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 130 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 181 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 101 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 181 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 181 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 181 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 174 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
IRF4 1 dataset
ChIP BC-3 GSE132777.IRF4.BC-3 118 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 181 bp overlap
JUN 3 datasets
ChIP BT-549 GSE46166.JUN.BT-549 181 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 99 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 176 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 95 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 74 bp overlap
JUND 3 datasets
ChIP HeLa-S3 ENCFF642OHL 163 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 121 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 83 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
ChIP retina_pigment GSE60024.LHX2.retina_pigment 142 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 173 bp overlap
MAFF 2 datasets
ChIP HeLa-S3 ENCFF783SBT 129 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 114 bp overlap
MAFK 2 datasets
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 83 bp overlap
ChIP IMR-90 ENCFF336DHZ 141 bp overlap
MAX 3 datasets
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 181 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 181 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 161 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 165 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 130 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 181 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 181 bp overlap
MYC 2 datasets
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 181 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 155 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 97 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 181 bp overlap
MYOD1 7 datasets
ChIP RD GSE137168.MYOD1.RD 181 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 181 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 181 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 181 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 181 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 155 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 181 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 181 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 128 bp overlap
NEUROG2 5 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 181 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 181 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 181 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 181 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 162 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 181 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 181 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 175 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 181 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 124 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 129 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
RAD21 5 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 132 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 181 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 157 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 141 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 181 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 58 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 181 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 181 bp overlap
ChIP neural cell ENCFF882LXX 181 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 181 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 149 bp overlap
SMARCA4 16 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 114 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 103 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 131 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 127 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 117 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 131 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 92 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 101 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 135 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 139 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 181 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 136 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 181 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 156 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 181 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 89 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 117 bp overlap
SMC3 6 datasets
ChIP HeLa GSE126990.SMC3.HeLa 181 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 181 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 181 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 181 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 152 bp overlap
ChIP HeLa_ESCO2-deltaPBMA_ctrl_siRNA GSE105004.SMC3.HeLa_ESCO2-deltaPBMA_ctrl_siRNA 181 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 120 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 181 bp overlap
SPI1 1 dataset
ChIP DC_LPS GSE123347.SPI1.DC_LPS 57 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 181 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 181 bp overlap
STAT1 1 dataset
ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 181 bp overlap
STAT3 9 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 181 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 181 bp overlap
ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 180 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 139 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 181 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 165 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 181 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 181 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 177 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 181 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 141 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 120 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 181 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 181 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 181 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 181 bp overlap
TWIST1 6 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 181 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 155 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 181 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 145 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 181 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 181 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 181 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 181 bp overlap