chr11 : 82,714,456 – 82,715,368
912 bp 96 TFs 1 linked gene
This 912 bp open chromatin element is linked to MIR4300HG and is bound by 96 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MIR4300HG 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:82,709,456 – 82,720,368
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 162 bp overlap
ARNT2 1 dataset
Motif DE_36h DE_36h-ARNT2_MA1464.2 8 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap
Arnt 1 dataset
Motif DE_36h DE_36h-Arnt_MA0004.1 6 bp overlap
Arntl 1 dataset
Motif DE_36h DE_36h-Arntl_MA0603.2 8 bp overlap
BHLHE22 2 datasets
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 207 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 292 bp overlap
Bcl11B 1 dataset
Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap
CBFA2T3 1 dataset
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 265 bp overlap
Creb3l2 1 dataset
Motif DE_36h DE_36h-Creb3l2_MA0608.1 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 183 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000AUQ.EP300.WA01 144 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 389 bp overlap
ERF::NHLH1 2 datasets
Motif DE_36h DE_36h-ERFNHLH1_MA1938.2 16 bp overlap
Motif DE_36h DE_36h-ERFNHLH1_MA1938.2 16 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 1 dataset
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
FEZF2 1 dataset
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 679 bp overlap
ChIP DE DE-FOXA2-2 730 bp overlap
GATA2 1 dataset
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 188 bp overlap
ChIP DE DE-GATA4-1 584 bp overlap
ChIP DE DE-GATA4-2 657 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 296 bp overlap
ChIP foregut GSE117136.GATA4.foregut 331 bp overlap
GATA5 1 dataset
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 576 bp overlap
ChIP DE DE-GATA6-2 691 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 652 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 785 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 683 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 665 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 901 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 708 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 511 bp overlap
GFI1 1 dataset
Motif DE_36h DE_36h-GFI1_MA0038.3 11 bp overlap
GRHL2 4 datasets
ChIP HBE GSE46194.GRHL2.HBE 199 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 249 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 237 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 365 bp overlap
Gata3 1 dataset
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Gfi1B 1 dataset
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 345 bp overlap
IKZF2 1 dataset
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 286 bp overlap
MAX 1 dataset
Motif DE_36h DE_36h-MAX_MA0058.4 6 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 157 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MNT 1 dataset
Motif DE_36h DE_36h-MNT_MA0825.2 6 bp overlap
MXI1 1 dataset
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
MYC 1 dataset
Motif DE_36h DE_36h-MYC_MA0147.4 8 bp overlap
Mlxip 1 dataset
Motif DE_36h DE_36h-Mlxip_MA0622.2 6 bp overlap
NFIB 1 dataset
Motif DE_36h DE_36h-NFIB_MA1643.2 17 bp overlap
NFIC 1 dataset
Motif DE_36h DE_36h-NFIC_MA1527.2 15 bp overlap
NFIC::TLX1 1 dataset
Motif DE_36h DE_36h-NFICTLX1_MA0119.1 14 bp overlap
NHLH2 1 dataset
Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap
NR1I2 1 dataset
Motif DE_36h DE_36h-NR1I2_MA1533.2 15 bp overlap
Neurod2 2 datasets
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
POU2F1 1 dataset
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
POU5F1 1 dataset
Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap
POU5F1B 1 dataset
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 188 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
RARA 1 dataset
Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap
RARA::RXRA 1 dataset
Motif DE_36h DE_36h-RARARXRA_MA0159.1 17 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 161 bp overlap
RUNX2 1 dataset
Motif DE_36h DE_36h-RUNX2_MA0511.2 9 bp overlap
RUNX3 1 dataset
Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap
Rarb 1 dataset
Motif DE_36h DE_36h-Rarb_MA0858.1 17 bp overlap
Runx1 1 dataset
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 508 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 766 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 486 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 602 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 622 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 293 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 476 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 184 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 271 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 379 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 204 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 356 bp overlap
Stat4 1 dataset
Motif DE_36h DE_36h-Stat4_MA0518.2 10 bp overlap
Stat5a::Stat5b 1 dataset
Motif DE_36h DE_36h-Stat5aStat5b_MA0519.2 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 175 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 198 bp overlap
TEAD3 1 dataset
Motif DE_36h DE_36h-TEAD3_MA0808.1 8 bp overlap
TEAD4 2 datasets
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 421 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 175 bp overlap
THRA 1 dataset
Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap
TRPS1 1 dataset
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Tcf12 2 datasets
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 260 bp overlap
ZBTB26 1 dataset
Motif DE_36h DE_36h-ZBTB26_MA1579.2 8 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZKSCAN5 1 dataset
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF136 1 dataset
Motif DE_36h DE_36h-ZNF136_MA1588.1 15 bp overlap
ZNF24 1 dataset
Motif DE_36h DE_36h-ZNF24_MA1124.1 13 bp overlap
ZNF257 1 dataset
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
ZNF382 1 dataset
Motif DE_36h DE_36h-ZNF382_MA1594.1 24 bp overlap
ZNF418 1 dataset
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
ZNF530 1 dataset
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
ZNF558 1 dataset
ChIP HEK293T GSE78099.ZNF558.HEK293T 182 bp overlap
ZNF582 1 dataset
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 181 bp overlap
ZNF75D 1 dataset
Motif DE_36h DE_36h-ZNF75D_MA1601.2 12 bp overlap
ZNF768 1 dataset
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
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