chr10 : 101,782,084 101,782,693
609 bp 87 TFs 2 linked genes
This 609 bp open chromatin element is linked to NPM3 and FGF8 and is bound by 87 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
NPM3 752 bp At TSS Proximity
FGF8 6.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:101,777,084 – 101,787,693
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 369 bp overlap
AR 2 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 108 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 139 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 270 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 111 bp overlap
BRCA1 1 dataset
ChIP K562 ENCFF777JCR 126 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 440 bp overlap
ChIP RKO GSE47190.BRD1.RKO 277 bp overlap
BRD4 8 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 52 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 122 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 222 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 99 bp overlap
ChIP COLO-205 GSE73319.BRD4.COLO-205 233 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 185 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 109 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 130 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 204 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 347 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 180 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 268 bp overlap
CTCF 1 dataset
ChIP CD14 ENCSR000ATN.CTCF.CD14 320 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 122 bp overlap
EP300 1 dataset
ChIP T-47D ENCSR000BLM.EP300.T-47D 109 bp overlap
ESR1 7 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 342 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 106 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 211 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 171 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 110 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 117 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 105 bp overlap
ETS1 2 datasets
ChIP OVCAR-8 GSE101832.ETS1.OVCAR-8 206 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 87 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 208 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 77 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 169 bp overlap
HCFC1 1 dataset
ChIP GM12878 ENCFF372SXO 150 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 53 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 188 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 65 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 157 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 514 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 73 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 131 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 384 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 55 bp overlap
MED1 5 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 273 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 326 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 429 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 335 bp overlap
ChIP MOLM-13 GSE154985.MED1.MOLM-13 184 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 289 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 322 bp overlap
MYC 9 datasets
ChIP DLD-1_MYC-activated GSE117240.MYC.DLD-1_MYC-activated 128 bp overlap
ChIP GP5D GSE51234.MYC.GP5D 194 bp overlap
ChIP LoVo_PHASES GSE51290.MYC.LoVo_PHASES 201 bp overlap
ChIP MCF-7 GSE154941.MYC.MCF-7 65 bp overlap
ChIP MDA-MB-231 GSE95303.MYC.MDA-MB-231 202 bp overlap
ChIP NB69 GSE138295.MYC.NB69 437 bp overlap
ChIP P493-6 GSE77061.MYC.P493-6 136 bp overlap
ChIP Raji GSE30726.MYC.Raji 150 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 118 bp overlap
MYCN 3 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 107 bp overlap
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 117 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 132 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 82 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 134 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 143 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NIPBL 3 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 341 bp overlap
ChIP GP5D GSE51234.NIPBL.GP5D 61 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 90 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 364 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 163 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 67 bp overlap
PGR 1 dataset
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 186 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 112 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 244 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 55 bp overlap
POLR2A 1 dataset
ChIP HCT116 ENCFF508RDJ 465 bp overlap
PRDM10 5 datasets
ChIP HEK293 ENCFF145WQQ 192 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 152 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 113 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 71 bp overlap
ChIP K562 ENCFF740YLK 133 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 186 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 200 bp overlap
RBM39 2 datasets
ChIP HepG2 ENCFF084YZE 118 bp overlap
ChIP HepG2 ENCFF801JUH 116 bp overlap
REST 1 dataset
ChIP CD4 GSE49570.REST.CD4 152 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 316 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 517 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 178 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 150 bp overlap
SCRT1 3 datasets
ChIP HEK293 ENCFF513YVP 417 bp overlap
ChIP HEK293 ENCFF513YVP 389 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 371 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 528 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 63 bp overlap
ChIP K-562 ENCSR920BLG.SIN3A.K-562 150 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 318 bp overlap
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 343 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 88 bp overlap
SMARCB1 1 dataset
ChIP HeLa-S3 ENCFF733PLR 50 bp overlap
SMC1 2 datasets
ChIP HCT-116 GSE131606.SMC1.HCT-116 108 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 185 bp overlap
SP2 2 datasets
ChIP HEK293 ENCFF181QXT 464 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 390 bp overlap
SP3 1 dataset
ChIP HEK293 ENCFF087XLA 446 bp overlap
STAG1 1 dataset
ChIP erythroid GSE67783.STAG1.erythroid 55 bp overlap
STAT3 1 dataset
ChIP OCI-Ly7 GSE50723.STAT3.OCI-Ly7 99 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 53 bp overlap
ChIP HCT-116_Nut3 GSE138548.SUPT5H.HCT-116_Nut3 177 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 189 bp overlap
TAF1 1 dataset
ChIP HepG2 ENCFF961AVP 121 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 501 bp overlap
TEAD1 1 dataset
ChIP HCT-116 GSE108920.TEAD1.HCT-116 440 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 87 bp overlap
YY1 3 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 145 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 280 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 245 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 468 bp overlap
ZEB1 4 datasets
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 94 bp overlap
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 211 bp overlap
ChIP RKO GSE88734.ZEB1.RKO 74 bp overlap
ChIP RKO GSE88734.ZEB1.RKO 379 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 540 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 235 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 190 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 260 bp overlap
ZNF513 2 datasets
ChIP HEK293 ENCFF457TCC 329 bp overlap
ChIP HEK293 ENCSR503DPC.ZNF513.HEK293 535 bp overlap
ZNF558 1 dataset
ChIP HepG2 ENCFF210VCS 129 bp overlap
ZNF605 1 dataset
ChIP HEK293T GSE78099.ZNF605.HEK293T 160 bp overlap
ZNF709 1 dataset
ChIP HepG2 ENCFF151DHM 553 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
ZNF772 1 dataset
ChIP HepG2 ENCFF728OGE 364 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 339 bp overlap