chr10 : 2,610,791 2,611,455
664 bp 91 TFs 0 linked genes
This 664 bp open chromatin element has no linked target genes and is bound by 91 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:2,605,791 – 2,616,455
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP GSE134626.ARID2.NGP 242 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 123 bp overlap
ATF2 1 dataset
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 245 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 409 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 129 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 175 bp overlap
BRD4 8 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 528 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 633 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 290 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 473 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 664 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 298 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 452 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 535 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 361 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 441 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 196 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 293 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 349 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 457 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 372 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 392 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 462 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
DUXA 1 dataset
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 234 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 234 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 523 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 313 bp overlap
EZH2 2 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 196 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 409 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 441 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 197 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 579 bp overlap
ChIP SK-N-SH ENCFF764OZD 209 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 457 bp overlap
GATA3 9 datasets
ChIP BE2C GSE65664.GATA3.BE2C 468 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 432 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 577 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 451 bp overlap
ChIP SH-SY5Y ENCFF475HYF 481 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 539 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 300 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 439 bp overlap
ChIP SK-N-SH ENCFF040SSB 365 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 420 bp overlap
ChIP DE DE-GATA4-2 386 bp overlap
ChIP foregut GSE117136.GATA4.foregut 278 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 388 bp overlap
ChIP DE DE-GATA6-2 398 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 478 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 270 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 429 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 463 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 261 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 399 bp overlap
ChIP foregut GSE117136.GATA6.foregut 287 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH ENCFF370MHZ 285 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 664 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 664 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 664 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
HOXB4 3 datasets
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
Motif DE_60h DE_60h-HOXB4_MA1499.2 6 bp overlap
Motif DE_60h DE_60h-HOXB4_MA1499.2 6 bp overlap
HOXC4 3 datasets
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
Motif DE_60h DE_60h-HOXC4_MA1504.2 6 bp overlap
Motif DE_60h DE_60h-HOXC4_MA1504.2 6 bp overlap
HOXD4 3 datasets
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
Motif DE_60h DE_60h-HOXD4_MA1507.2 6 bp overlap
Motif DE_60h DE_60h-HOXD4_MA1507.2 6 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 630 bp overlap
ChIP SK-N-SH ENCFF285GEQ 485 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 357 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCFF971JKN 291 bp overlap
KDM1A 3 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 184 bp overlap
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 243 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 608 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 221 bp overlap
MAX 1 dataset
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 178 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 369 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 426 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 319 bp overlap
MGA::EVX1 2 datasets
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 222 bp overlap
MYCN 12 datasets
ChIP BE2C GSE80151.MYCN.BE2C 274 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 664 bp overlap
ChIP IMR-5_DMSO GSE78957.MYCN.IMR-5_DMSO 78 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 575 bp overlap
ChIP Kelly GSE80151.MYCN.Kelly 244 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 462 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 384 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 582 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 402 bp overlap
ChIP NGP GSE80151.MYCN.NGP 296 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 274 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 415 bp overlap
NEUROD1 2 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 255 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap
NKX6-3 2 datasets
Motif DE_48h DE_48h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_60h DE_60h-NKX6-3_MA1530.2 8 bp overlap
NRF1 2 datasets
ChIP HCC1954 GSE67867.NRF1.HCC1954 134 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 123 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 260 bp overlap
OSR2 1 dataset
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 488 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 175 bp overlap
PHOX2A 1 dataset
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 3 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 664 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 368 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 664 bp overlap
POU6F1 2 datasets
Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap
Motif DE_60h DE_60h-POU6F1_MA1549.2 7 bp overlap
POU6F2 2 datasets
Motif DE_48h DE_48h-POU6F2_MA0793.2 9 bp overlap
Motif DE_60h DE_60h-POU6F2_MA0793.2 9 bp overlap
PPARA 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR602QEJ.PPARA.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 161 bp overlap
PROP1 1 dataset
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 349 bp overlap
RAD21 5 datasets
ChIP IMR-5 GSE78957.RAD21.IMR-5 141 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 334 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 313 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 183 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 626 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCFF861MKH 245 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 424 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 331 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 328 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 375 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 536 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 383 bp overlap
SMARCA4 5 datasets
ChIP NGP GSE134626.SMARCA4.NGP 565 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 470 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 631 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 664 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 170 bp overlap
SOX13 2 datasets
Motif DE_48h DE_48h-SOX13_MA1120.2 7 bp overlap
Motif DE_60h DE_60h-SOX13_MA1120.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 313 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 429 bp overlap
SOX2 2 datasets
Motif DE_48h DE_48h-SOX2_MA0143.5 7 bp overlap
Motif DE_60h DE_60h-SOX2_MA0143.5 7 bp overlap
SREBF1 2 datasets
Motif DE_48h DE_48h-SREBF1_MA0595.1 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0595.1 10 bp overlap
SREBF2 2 datasets
Motif DE_48h DE_48h-SREBF2_MA0596.1 10 bp overlap
Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap
SS18 1 dataset
ChIP NGP_ARID1A-mut1 GSE134626.SS18.NGP_ARID1A-mut1 205 bp overlap
Sox3 2 datasets
Motif DE_48h DE_48h-Sox3_MA0514.3 7 bp overlap
Motif DE_60h DE_60h-Sox3_MA0514.3 7 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 565 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 417 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 421 bp overlap
ChIP SK-N-SH ENCFF270OWF 437 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 638 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 638 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 456 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 353 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 267 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 381 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 381 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 478 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 344 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 344 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 169 bp overlap
YY1 1 dataset
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 118 bp overlap
ZFP42 2 datasets
Motif DE_48h DE_48h-ZFP42_MA1651.2 13 bp overlap
Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap
ZNF184 1 dataset
Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 468 bp overlap
ZNF528 1 dataset
Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap
ZNF667 2 datasets
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
ZNF707 1 dataset
Motif DE_60h DE_60h-ZNF707_MA1715.1 15 bp overlap
ZNF85 1 dataset
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap