chr8 : 48,555,641 48,555,843
202 bp 82 TFs 1 linked gene
This 202 bp open chromatin element is linked to ENSG00000253688 and is bound by 82 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000253688 548 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:48,550,641 – 48,560,843
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AR 7 datasets
ChIP prostate GSE56288.AR.prostate 202 bp overlap
ChIP prostate_1592_T GSE130408.AR.prostate_1592_T 148 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 189 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 55 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 177 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 108 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 148 bp overlap
ARID2 3 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 192 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 202 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 202 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 202 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 202 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 179 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 202 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 202 bp overlap
BRD2 2 datasets
ChIP SUM159PT_JQ1 GSE116879.BRD2.SUM159PT_JQ1 202 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 202 bp overlap
BRD4 10 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 150 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 136 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 202 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 68 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 60 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 202 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 179 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 72 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 202 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 147 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 138 bp overlap
CDK8 2 datasets
ChIP SET-2 GSE65138.CDK8.SET-2 202 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 81 bp overlap
CDK9 1 dataset
ChIP Kelly_CYC065 GSE107126.CDK9.Kelly_CYC065 119 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 202 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 202 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 121 bp overlap
CTCF 29 datasets
ChIP A-673 ENCSR611JJS.CTCF.A-673 198 bp overlap
ChIP BE2C ENCFF757SRF 202 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 130 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 94 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 118 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 177 bp overlap
ChIP SK-N-SH ENCFF731NJX 202 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 202 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 95 bp overlap
ChIP body of pancreas ENCFF269EDN 76 bp overlap
ChIP body of pancreas ENCFF798MEO 185 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 202 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 74 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 136 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 85 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 202 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 202 bp overlap
ChIP heart right ventricle ENCFF979TCT 202 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 202 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 202 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 195 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 144 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 52 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 174 bp overlap
ChIP prostate ENCSR946MNG.CTCF.prostate 202 bp overlap
ChIP prostate gland ENCFF655GBO 202 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 202 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 181 bp overlap
ChIP thyroid gland ENCFF163TUI 166 bp overlap
E2F1 2 datasets
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 202 bp overlap
ChIP mesenchymal GSE77260.E2F1.mesenchymal 149 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 171 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 202 bp overlap
E2F7 2 datasets
ChIP IMR-90_SENES_E2F7 GSE40343.E2F7.IMR-90_SENES_E2F7 153 bp overlap
ChIP IMR-90_SENES_SHCTR GSE40343.E2F7.IMR-90_SENES_SHCTR 117 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 112 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 202 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 202 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 184 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 202 bp overlap
EZH2 7 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 71 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 202 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 184 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 82 bp overlap
ChIP neural progenitor cell ENCFF472NFV 99 bp overlap
ChIP neural progenitor cell ENCFF472NFV 67 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 123 bp overlap
FOS 1 dataset
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 110 bp overlap
FOXA1 1 dataset
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 188 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 125 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 88 bp overlap
GATA6 3 datasets
ChIP DE_D2 S55-DE-d2-GATA6-exp2 73 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 138 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 102 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 146 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 202 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 195 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 137 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 202 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 58 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 202 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 202 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 202 bp overlap
MED1 8 datasets
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 107 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 106 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 151 bp overlap
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 183 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 114 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 127 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 202 bp overlap
ChIP myoblast GSE60026.MED1.myoblast 53 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 179 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 57 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MTF1 1 dataset
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 202 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 169 bp overlap
MYC 3 datasets
ChIP Kelly GSE138295.MYC.Kelly 202 bp overlap
ChIP NB69 GSE138295.MYC.NB69 86 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 202 bp overlap
MYCN 9 datasets
ChIP BE2C GSE80151.MYCN.BE2C 202 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 93 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 180 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 127 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 189 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 202 bp overlap
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 79 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 202 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 148 bp overlap
MYOD1 3 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 156 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 202 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 154 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 202 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 200 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 202 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 197 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 202 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 153 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 101 bp overlap
POLR2A 6 datasets
ChIP IMR-90 ENCFF672YWV 178 bp overlap
ChIP SK-N-MC ENCFF088IVG 202 bp overlap
ChIP body of pancreas ENCFF501FEC 202 bp overlap
ChIP body of pancreas ENCFF727UBE 202 bp overlap
ChIP prostate gland ENCFF545MVF 174 bp overlap
ChIP prostate gland ENCFF545MVF 202 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 151 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 83 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 202 bp overlap
ChIP H1 ENCFF967OJF 202 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 147 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 112 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 202 bp overlap
ChIP SK-N-SH ENCFF747MAS 202 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 202 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 202 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 131 bp overlap
RNF2 2 datasets
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 202 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 179 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 184 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 202 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 195 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 125 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 125 bp overlap
SIN3A 3 datasets
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 148 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 128 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 90 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 133 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SMARCA4 6 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 202 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 150 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 202 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 202 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 202 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 202 bp overlap
SMC1 2 datasets
ChIP HCAEC GSE101921.SMC1.HCAEC 202 bp overlap
ChIP IMR-90_G GSE118494.SMC1.IMR-90_G 158 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 202 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 160 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 137 bp overlap
SUZ12 3 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 176 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 202 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 120 bp overlap
TAF1 3 datasets
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 185 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 135 bp overlap
ChIP neural ENCSR000BTX.TAF1.neural 115 bp overlap
TCF12 1 dataset
ChIP H1 ENCFF203EBH 93 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 202 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 186 bp overlap
TP53 2 datasets
ChIP GM00011 GSE55727.TP53.GM00011 57 bp overlap
ChIP GM06170 GSE55727.TP53.GM06170 202 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 177 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 202 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 202 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF610 1 dataset
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap