chr8 : 8,649,084 8,649,803
719 bp 83 TFs 2 linked genes
This 719 bp open chromatin element is linked to MFHAS1 and PRAG1 and is bound by 83 transcription factors.
Linked Genes
2 genes
Link type
Gene Expression Dist. to TSS Distance Link type
MFHAS1 244.2 kb Distal Multiome
PRAG1 263.0 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:8,644,084 – 8,654,803
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 192 bp overlap
ARNTL 2 datasets
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR949COJ.ARNTL.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 160 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR949COJ.ARNTL.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 140 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 273 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 110 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 195 bp overlap
BRD4 3 datasets
ChIP SW480 GSE73319.BRD4.SW480 265 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 156 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 67 bp overlap
CDK8 1 dataset
ChIP SW480 GSE53602.CDK8.SW480 456 bp overlap
CDX2 3 datasets
ChIP LS180 GSE31939.CDX2.LS180 246 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 111 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 219 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 220 bp overlap
CEBPB 2 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 255 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 139 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 115 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 171 bp overlap
CTNNB1 1 dataset
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 170 bp overlap
Cebpa 6 datasets
ChIP BLaER1 ENCFF031ISE 292 bp overlap
ChIP BLaER1 ENCFF274GAT 498 bp overlap
ChIP BLaER1 ENCFF335XTP 178 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
ChIP BLaER1 ENCFF460KDD 174 bp overlap
ChIP BLaER1 ENCFF798NMV 211 bp overlap
EGR1 2 datasets
ChIP GM12878 ENCFF092DJY 211 bp overlap
ChIP GM12878 ENCSR000BMQ.EGR1.GM12878 90 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 302 bp overlap
EP300 6 datasets
ChIP SK-N-SH ENCFF829RWA 124 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 92 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 64 bp overlap
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 126 bp overlap
ChIP tibial nerve ENCFF346AYA 313 bp overlap
ChIP tibial nerve ENCFF346AYA 505 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 154 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 212 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 134 bp overlap
ChIP DE DE-FOXA2-1 281 bp overlap
ChIP DE DE-FOXA2-2 382 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 200 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 156 bp overlap
FOXM1 1 dataset
ChIP SK-N-SH ENCFF404RGX 129 bp overlap
FOXP2 2 datasets
ChIP PFSK-1 ENCFF349WGE 176 bp overlap
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 81 bp overlap
GATA2 3 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 185 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 175 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 183 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 472 bp overlap
ChIP DE DE-GATA4-2 668 bp overlap
ChIP foregut GSE117136.GATA4.foregut 266 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 496 bp overlap
ChIP DE DE-GATA6-2 659 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 676 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 590 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 651 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 463 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 718 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 714 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 205 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 450 bp overlap
GPS2 1 dataset
ChIP hMADS_D0_E GSE152517.GPS2.hMADS_D0_E 194 bp overlap
GRHL2 1 dataset
ChIP PEO1 GSE71018.GRHL2.PEO1 159 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 196 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 193 bp overlap
HNF4A 5 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 226 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 112 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 371 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 292 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 580 bp overlap
HOXB13 2 datasets
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 189 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 508 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 207 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 175 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 597 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 719 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 706 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCFF551NEQ 54 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 87 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 126 bp overlap
KLF5 4 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 588 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 307 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 259 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 175 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCFF285LXR 217 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 102 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 212 bp overlap
MYCN 5 datasets
ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 59 bp overlap
ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 144 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 183 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 142 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 142 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 431 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 119 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 161 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 307 bp overlap
NOTCH1 1 dataset
ChIP MDA-MB-157 GSE116868.NOTCH1.MDA-MB-157 357 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 611 bp overlap
PCBP2 2 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 195 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 195 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 260 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 123 bp overlap
POLR2A 2 datasets
ChIP breast epithelium ENCFF065JSZ 217 bp overlap
ChIP spleen ENCFF044PYR 262 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 486 bp overlap
RARB 1 dataset
ChIP SK-N-SH ENCFF475WOR 94 bp overlap
RBPJ 1 dataset
ChIP MDA-MB-157 GSE116868.RBPJ.MDA-MB-157 435 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCFF518EXB 101 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCFF893DLM 87 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 54 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 52 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 719 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 719 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 719 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 719 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 684 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 719 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 345 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 403 bp overlap
SMAD4 3 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 265 bp overlap
ChIP Caco-2 GSE112946.SMAD4.Caco-2 211 bp overlap
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 81 bp overlap
SMARCA2 4 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 278 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 175 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 268 bp overlap
ChIP NPC_R1159Q_ab GSE122631.SMARCA2.NPC_R1159Q_ab 298 bp overlap
SMARCA4 6 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 213 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 351 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 220 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 266 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 125 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 554 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 621 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 719 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 555 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 424 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 95 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 332 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 663 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 100 bp overlap
SPI1 13 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 156 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 182 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 186 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 227 bp overlap
ChIP GM12878 ENCFF134LCP 297 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 172 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 131 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 194 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 171 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 153 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 122 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 136 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 187 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 169 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 236 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 62 bp overlap
TCF4 2 datasets
ChIP LS180 GSE31939.TCF4.LS180 92 bp overlap
ChIP SK-N-SH ENCFF270OWF 154 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 175 bp overlap
TEAD4 4 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 67 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 67 bp overlap
ChIP SK-N-SH ENCFF754TJT 83 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 130 bp overlap
TP53 1 dataset
ChIP H9 GSE142050.TP53.H9 340 bp overlap
TP63 2 datasets
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 242 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 219 bp overlap
TWIST1 5 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 119 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 107 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 133 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 119 bp overlap
ChIP SHEP-21N_DOX_24H GSE80151.TWIST1.SHEP-21N_DOX_24H 93 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 105 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 122 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap