chr7 : 129,914,750 129,915,367
617 bp 82 TFs 4 linked genes
This 617 bp open chromatin element is linked to 4 target genes and is bound by 82 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
UBE2H 37.8 kb Distal Multiome
ZC3HC1 136.2 kb Distal Multiome
KLHDC10 155.4 kb Distal Multiome
TMEM209 290.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:129,909,750 – 129,920,367
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 286 bp overlap
BCL11A 5 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 90 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 58 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 63 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 58 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 68 bp overlap
BRD4 2 datasets
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 371 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 58 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 126 bp overlap
ChIP K562 ENCFF673OEZ 168 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 185 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 101 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 279 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 347 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 203 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 257 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 212 bp overlap
ChIP DE DE-FOXA2-1 565 bp overlap
ChIP DE DE-FOXA2-2 598 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 231 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 134 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 125 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 84 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 206 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 138 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 200 bp overlap
ChIP erythroblast ENCFF867JAR 398 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 347 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 146 bp overlap
GATA2 1 dataset
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 86 bp overlap
GATA3 2 datasets
ChIP Kelly GSE65664.GATA3.Kelly 132 bp overlap
ChIP SK-N-SH ENCFF040SSB 348 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 575 bp overlap
ChIP DE DE-GATA4-2 564 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 208 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 544 bp overlap
ChIP DE DE-GATA6-2 593 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 488 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 391 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 308 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 338 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 117 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 282 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 90 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 391 bp overlap
ISL1 3 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 101 bp overlap
ChIP SK-N-SH ENCFF285GEQ 87 bp overlap
ChIP SK-N-SH ENCFF285GEQ 216 bp overlap
JUN 1 dataset
ChIP myometrium_PT1063 GSE128230.JUN.myometrium_PT1063 58 bp overlap
KDM1A 2 datasets
ChIP K-562 GSE117944.KDM1A.K-562 164 bp overlap
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 226 bp overlap
KLF3 1 dataset
ChIP HEK293 GSE69739.KLF3.HEK293 174 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 282 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 174 bp overlap
KMT2A 2 datasets
ChIP MV4-11 GSE79899.KMT2A.MV4-11 207 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 370 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 90 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 311 bp overlap
MEIS1 2 datasets
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 260 bp overlap
ChIP HEK293 ENCFF821TIY 385 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 459 bp overlap
ChIP K562 ENCFF320GSD 325 bp overlap
MEN1 1 dataset
ChIP HCT-116_B1 GSE152144.MEN1.HCT-116_B1 278 bp overlap
MITF 1 dataset
ChIP K562 ENCFF731XJJ 186 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 223 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 63 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 99 bp overlap
MYOD1 2 datasets
ChIP myoblast GSE50413.MYOD1.myoblast 259 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 167 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 490 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 425 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 283 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 63 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 324 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 328 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 450 bp overlap
ChIP K562 ENCFF286KMN 349 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 175 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 213 bp overlap
ChIP islet ERP001456.PDX1.islet 163 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 348 bp overlap
PGR 2 datasets
ChIP AB32 GSE31129.PGR.AB32 219 bp overlap
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 293 bp overlap
PGR_B 1 dataset
ChIP hESC GSE62475.PGR_B.hESC 195 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 266 bp overlap
PKNOX1 5 datasets
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 234 bp overlap
ChIP HEK293T ENCFF174WDB 251 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 339 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 479 bp overlap
ChIP K562 ENCFF236IUS 371 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 146 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 270 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 164 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 421 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 264 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 505 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 166 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 521 bp overlap
RBPJ 1 dataset
ChIP LCL GSE75503.RBPJ.LCL 208 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 174 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 365 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 347 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_EV-TGF GSE138496.SMAD2-3.HGrC1_EV-TGF 177 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 617 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 508 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 534 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 386 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 431 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 456 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 617 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 582 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 481 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 307 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 362 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 207 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 171 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH ENCFF449PID 97 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 488 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 617 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 358 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 294 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 406 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 112 bp overlap
TAL1 3 datasets
ChIP CD34 GSE52924.TAL1.CD34 118 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 130 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 129 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 73 bp overlap
ChIP Kelly GSE94822.TBX2.Kelly 285 bp overlap
TBX21 2 datasets
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 236 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 131 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 391 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 394 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 394 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 198 bp overlap
ZNF239 1 dataset
ChIP K562 ENCFF703IKI 163 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 181 bp overlap