chr7 : 129,258,745 129,258,980
235 bp 102 TFs 0 linked genes
This 235 bp open chromatin element has no linked target genes and is bound by 102 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:129,253,745 – 129,263,980
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 235 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 235 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 198 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 140 bp overlap
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 164 bp overlap
BRD4 4 datasets
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 110 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 202 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 235 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 235 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 235 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 235 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 92 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 164 bp overlap
ChIP H1 ENCFF126NLU 162 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 235 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 235 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 129 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 213 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 210 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 152 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 235 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 184 bp overlap
ChIP hESC GSE17917.EP300.hESC 235 bp overlap
ETS1 1 dataset
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 235 bp overlap
EZH2 2 datasets
ChIP neural progenitor cell ENCFF018MKA 235 bp overlap
ChIP neural progenitor cell ENCFF018MKA 235 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FLI1 3 datasets
ChIP A-673 GSE99959.FLI1.A-673 235 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 235 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 235 bp overlap
FOSL2 1 dataset
ChIP NPC GSE122631.FOSL2.NPC 232 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 89 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 235 bp overlap
ChIP DE DE-FOXA2-2 235 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 212 bp overlap
ChIP DE DE-GATA4-2 235 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 235 bp overlap
ChIP DE DE-GATA6-2 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 235 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 228 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 235 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 200 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 138 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 235 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 235 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 235 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 235 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 168 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 235 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 235 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 131 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 235 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 235 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 235 bp overlap
ChIP hESC GSE20650.NANOG.hESC 223 bp overlap
ChIP hESC GSE18292.NANOG.hESC 204 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 235 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 215 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 110 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 191 bp overlap
OTX2 2 datasets
ChIP WTC11 ENCFF634NAO 209 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 206 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 191 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF566JSR 235 bp overlap
ChIP H1 ENCFF566JSR 82 bp overlap
ChIP H1 ENCFF833NJP 235 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 16 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 129 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 235 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 235 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 235 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 235 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 230 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 174 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 226 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 218 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 182 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 235 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 235 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 214 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 235 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 193 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 110 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 235 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 121 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 235 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 235 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 235 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 218 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 203 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 156 bp overlap
RBPJ 3 datasets
ChIP GIC GSE79734.RBPJ.GIC 171 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 235 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 218 bp overlap
RELA 4 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 213 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 234 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 166 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 132 bp overlap
RFX1 9 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 235 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 235 bp overlap
ChIP K562 ENCFF421AVO 231 bp overlap
ChIP K562 ENCFF809XVG 235 bp overlap
ChIP MCF-7 ENCFF782EZS 235 bp overlap
ChIP MCF-7 ENCFF973QAD 235 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 235 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 235 bp overlap
RFX2 1 dataset
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
RFX3 1 dataset
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
RFX5 1 dataset
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE76181.RUNX1.Jurkat 173 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 152 bp overlap
SMARCA2 2 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 223 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 235 bp overlap
SMARCA4 9 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 225 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 235 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 185 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 235 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 235 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 235 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 167 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 235 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 219 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 235 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 235 bp overlap
SMARCC1 4 datasets
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 186 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 92 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 235 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 195 bp overlap
SOX2 11 datasets
ChIP HNSC GSE69479.SOX2.HNSC 235 bp overlap
ChIP NPC GSE122631.SOX2.NPC 229 bp overlap
ChIP OSvKM GSE81899.SOX2.OSvKM 235 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 157 bp overlap
ChIP hESC GSE69479.SOX2.hESC 209 bp overlap
ChIP hESC GSE18292.SOX2.hESC 181 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 235 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 220 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 235 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 225 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 235 bp overlap
SOX21 2 datasets
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 235 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 208 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 235 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 235 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 216 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 233 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 235 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 106 bp overlap
TBP 3 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 155 bp overlap
ChIP hESC GSE122298.TBP.hESC 205 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 235 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TP53 3 datasets
Motif DE_12h DE_12h-TP53_MA0106.3 18 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 107 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 234 bp overlap
YY1 1 dataset
ChIP H1 ENCFF524BTL 219 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 202 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 235 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap