chr7 : 41,701,195 41,701,677
482 bp 85 TFs 2 linked genes
This 482 bp open chromatin element is linked to INHBA and INHBA-AS1 and is bound by 85 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
INHBA 586 bp At TSS Proximity
INHBA-AS1 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:41,696,195 – 41,706,677
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 221 bp overlap
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 227 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 347 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 482 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 75 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 77 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 330 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 482 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 279 bp overlap
BRD2 3 datasets
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 133 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 446 bp overlap
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 293 bp overlap
BRD4 8 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 196 bp overlap
ChIP HCC1806_DMSO_24h GSE87418.BRD4.HCC1806_DMSO_24h 360 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 367 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 86 bp overlap
ChIP SUM149_DMSO GSE63581.BRD4.SUM149_DMSO 104 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 482 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 171 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 482 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 133 bp overlap
CDK9 2 datasets
ChIP A-375_A771726 GSE68052.CDK9.A-375_A771726 474 bp overlap
ChIP A-375_DMSO GSE57431.CDK9.A-375_DMSO 278 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 195 bp overlap
CHD1 2 datasets
ChIP IMR-90 ENCFF921SVK 163 bp overlap
ChIP hMSC-TERT_adipocyte GSE89179.CHD1.hMSC-TERT_adipocyte 482 bp overlap
CREBBP 2 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 142 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 143 bp overlap
CTCF 10 datasets
ChIP AG04449 ENCFF248MBD 170 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP PC-9 ENCFF539ULB 103 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 230 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 98 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 101 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 123 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 183 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 231 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 183 bp overlap
CTCFL 3 datasets
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
ChIP FT282 GSE131931.CTCFL.FT282 115 bp overlap
ChIP FT282 GSE131931.CTCFL.FT282 269 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 201 bp overlap
ETS1 2 datasets
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 256 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 137 bp overlap
EZH2 3 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 263 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 482 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 482 bp overlap
EZH2_phosphoT487 3 datasets
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 203 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 199 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 51 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 365 bp overlap
GRHL1 2 datasets
ChIP MCF-7 GSE140185.GRHL1.MCF-7 76 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.GRHL1.MCF-7_ARID1A-KO 87 bp overlap
GRHL2 5 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 80 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 120 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 105 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 100 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 100 bp overlap
HDAC2 3 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 134 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 154 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 154 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 365 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 209 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 152 bp overlap
MAX 4 datasets
ChIP H1 ENCFF914VQY 244 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 144 bp overlap
ChIP WTC11 ENCFF223QFY 212 bp overlap
ChIP WTC11 ENCFF223QFY 428 bp overlap
MED1 5 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 226 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 225 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 306 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 146 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 130 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 482 bp overlap
MXI1 1 dataset
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 186 bp overlap
MYC 1 dataset
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 151 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 482 bp overlap
ChIP hESC GSE18292.NANOG.hESC 135 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 302 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 482 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 196 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 212 bp overlap
NKX2-2 1 dataset
Motif DE_12h DE_12h-NKX2-2_MA1645.2 8 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 196 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 287 bp overlap
POLR2A 5 datasets
ChIP IMR-90 ENCFF672YWV 482 bp overlap
ChIP MCF-7 ENCFF411WCU 285 bp overlap
ChIP MCF-7 ENCFF411WCU 294 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 89 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 61 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 386 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 378 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
RAD21 2 datasets
ChIP MDM GSE103477.RAD21.MDM 482 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 83 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 191 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 224 bp overlap
RNF2 2 datasets
ChIP WA01 ENCSR784VUY.RNF2.WA01 429 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 98 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 196 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 450 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
SAP30 2 datasets
ChIP WA01 ENCSR000ATR.SAP30.WA01 144 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 242 bp overlap
SIN3A 2 datasets
ChIP SK-N-SH ENCFF931NFD 68 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 213 bp overlap
SMAD3 1 dataset
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 129 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 204 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 341 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 374 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 198 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 391 bp overlap
SNAPC1 1 dataset
ChIP MCF-10A GSE37403.SNAPC1.MCF-10A 297 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 293 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 278 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 291 bp overlap
SSRP1 1 dataset
ChIP hiF-T GSE98758.SSRP1.hiF-T 482 bp overlap
STAG1 1 dataset
ChIP MCF-7 ERP000209.STAG1.MCF-7 151 bp overlap
SUPT5H 4 datasets
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 447 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 61 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 135 bp overlap
ChIP U2OS_siMYC_ON GSE115365.SUPT5H.U2OS_siMYC_ON 98 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 146 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 264 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TP53 1 dataset
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 281 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 204 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 172 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 197 bp overlap
USF2 3 datasets
ChIP IMR-90 ENCFF438KUN 204 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 171 bp overlap
ChIP WTC11 ENCFF139JAW 274 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZBTB26 1 dataset
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 113 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 421 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 262 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap